Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 RNF185-202ENST00000326132 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 KANK1-206ENST00000382303 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 DCX-210ENST00000637453 2275 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
HOXD11P31277 GPR156-203ENST00000464295 4442 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
HOXD11P31277 RAP2C-205ENST00000620646 3341 ntTSL 5 BASIC9.38□□□□□ -0.91
HOXD11P31277 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HOXD11P31277 FAM13A-222ENST00000515600 2206 ntAPPRIS ALT2 TSL 3 BASIC9.37□□□□□ -0.91
HOXD11P31277 TOP3A-201ENST00000321105 4056 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 AHI1-202ENST00000327035 3638 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 C12orf40-201ENST00000324616 2776 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 PCDHGA2-201ENST00000394576 4605 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 TPM1-233ENST00000610733 3957 ntTSL 2 BASIC9.37□□□□□ -0.91
HOXD11P31277 C20orf197-201ENST00000625080 2732 ntTSL 2 BASIC9.37□□□□□ -0.91
HOXD11P31277 METTL15-203ENST00000406787 4304 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 DNAJC3-201ENST00000376795 2273 ntTSL 5 BASIC9.37□□□□□ -0.91
HOXD11P31277 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
HOXD11P31277 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 RNU1-47P-201ENST00000362966 163 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 U3.46-201ENST00000365612 216 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 AC132008.1-201ENST00000394682 286 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 AL359694.1-201ENST00000403247 604 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 AL035079.1-201ENST00000405210 287 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 SNORD56-201ENST00000413522 71 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC9.37□□□□□ -0.91
HOXD11P31277 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC9.37□□□□□ -0.91
HOXD11P31277 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC9.37□□□□□ -0.91
HOXD11P31277 HMGB1P27-201ENST00000431429 603 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 Z98752.2-201ENST00000432727 312 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC9.37□□□□□ -0.91
HOXD11P31277 AC004448.3-201ENST00000435953 543 ntTSL 2 BASIC9.37□□□□□ -0.91
HOXD11P31277 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC9.37□□□□□ -0.91
HOXD11P31277 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC9.37□□□□□ -0.91
HOXD11P31277 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC9.37□□□□□ -0.91
HOXD11P31277 AP000266.1-201ENST00000450936 582 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC9.37□□□□□ -0.91
HOXD11P31277 RPL7AP56-201ENST00000476420 791 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 RPS15AP34-201ENST00000487776 387 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 RN7SL62P-201ENST00000498506 297 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 RNU1-86P-201ENST00000516108 154 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 RNU1-107P-201ENST00000516617 154 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 SNORA70.23-201ENST00000517218 151 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 AC011676.1-201ENST00000517658 397 ntTSL 3 BASIC9.37□□□□□ -0.91
HOXD11P31277 AC108449.1-201ENST00000523661 457 ntTSL 3 BASIC9.37□□□□□ -0.91
HOXD11P31277 AP000866.4-201ENST00000533974 448 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 AL022318.2-201ENST00000558766 258 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC9.37□□□□□ -0.91
HOXD11P31277 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC9.37□□□□□ -0.91
HOXD11P31277 AC087783.2-201ENST00000605070 562 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC9.37□□□□□ -0.91
HOXD11P31277 AL136967.1-201ENST00000625120 441 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 UGP2-230ENST00000626380 276 ntTSL 5 BASIC9.37□□□□□ -0.91
HOXD11P31277 KIAA0355-201ENST00000299505 6717 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 PPIG-202ENST00000409714 2615 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC9.37□□□□□ -0.91
HOXD11P31277 ZNF585A-203ENST00000392157 3190 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 ZSCAN5B-201ENST00000358992 1626 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
HOXD11P31277 AL359396.1-201ENST00000623151 2376 ntBASIC9.37□□□□□ -0.91
HOXD11P31277 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC9.37□□□□□ -0.91
HOXD11P31277 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
HOXD11P31277 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 DNAJC6-202ENST00000371069 5365 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 AC024651.1-201ENST00000561121 1963 ntTSL 3 BASIC9.37□□□□□ -0.91
HOXD11P31277 HHAT-203ENST00000367010 3626 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
HOXD11P31277 GRIK1-207ENST00000399914 3624 ntTSL 5 BASIC9.37□□□□□ -0.91
HOXD11P31277 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 TACC2-210ENST00000369005 9673 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 ITIH5-202ENST00000397146 6721 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 EDNRB-202ENST00000377211 4471 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
HOXD11P31277 ADGRE3-202ENST00000344373 2267 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HOXD11P31277 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HOXD11P31277 GPR55-201ENST00000392039 1523 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
HOXD11P31277 TMEM241-201ENST00000383233 2934 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
HOXD11P31277 MYT1L-203ENST00000407844 3642 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HOXD11P31277 CCDC181-207ENST00000545005 2035 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
HOXD11P31277 SLC17A1-201ENST00000244527 1844 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
HOXD11P31277 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HOXD11P31277 TGOLN2-201ENST00000282120 6419 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
HOXD11P31277 ADGRG1-216ENST00000562631 4042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HOXD11P31277 XPR1-202ENST00000367590 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HOXD11P31277 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
HOXD11P31277 MROH8-203ENST00000400441 3345 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
HOXD11P31277 HIST1H2BI-201ENST00000377733 381 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
HOXD11P31277 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
HOXD11P31277 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC9.36□□□□□ -0.91
HOXD11P31277 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC9.36□□□□□ -0.91
HOXD11P31277 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC9.36□□□□□ -0.91
HOXD11P31277 TISP43-205ENST00000440359 543 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
HOXD11P31277 SPATA24-203ENST00000451821 646 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
HOXD11P31277 RPL10P6-201ENST00000457497 318 ntBASIC9.36□□□□□ -0.91
HOXD11P31277 RN7SL156P-201ENST00000480334 304 ntBASIC9.36□□□□□ -0.91
HOXD11P31277 RN7SL505P-201ENST00000482644 293 ntBASIC9.36□□□□□ -0.91
HOXD11P31277 PGAM1P8-201ENST00000526979 453 ntBASIC9.36□□□□□ -0.91
HOXD11P31277 AC100767.1-201ENST00000528178 123 ntBASIC9.36□□□□□ -0.91
HOXD11P31277 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC9.36□□□□□ -0.91
HOXD11P31277 AP005597.3-201ENST00000532369 799 ntBASIC9.36□□□□□ -0.91
HOXD11P31277 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms