Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC13P31276 RN7SL354P-201ENST00000469282 294 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 AC097484.1-201ENST00000471148 389 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 AC025181.1-201ENST00000477507 416 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 AC005912.1-201ENST00000495392 255 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 CDH12P2-201ENST00000504393 298 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 AC093720.1-201ENST00000505681 714 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC13P31276 HPRT1P1-201ENST00000509498 657 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.31□□□□□ -1.56
HOXC13P31276 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.31□□□□□ -1.56
HOXC13P31276 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.31□□□□□ -1.56
HOXC13P31276 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC13P31276 AL136370.1-201ENST00000608166 691 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 EIF3FP1-201ENST00000613970 806 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC13P31276 AC011472.4-201ENST00000615848 491 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 MIR7641-1-201ENST00000627518 61 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC13P31276 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC13P31276 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HOXC13P31276 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC13P31276 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HOXC13P31276 DDX18P4-201ENST00000511690 1966 ntBASIC5.31□□□□□ -1.56
HOXC13P31276 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
HOXC13P31276 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HOXC13P31276 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXC13P31276 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXC13P31276 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC13P31276 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HOXC13P31276 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HOXC13P31276 RNA5SP191-201ENST00000362585 102 ntBASIC5.3□□□□□ -1.56
HOXC13P31276 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 RNU4-31P-201ENST00000384211 141 ntBASIC5.3□□□□□ -1.56
HOXC13P31276 AL590139.1-201ENST00000416267 400 ntBASIC5.3□□□□□ -1.56
HOXC13P31276 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC13P31276 RPS4XP12-201ENST00000461747 709 ntBASIC5.3□□□□□ -1.56
HOXC13P31276 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC13P31276 HMGN2P25-201ENST00000486956 268 ntBASIC5.3□□□□□ -1.56
HOXC13P31276 AC005412.2-201ENST00000492004 341 ntBASIC5.3□□□□□ -1.56
HOXC13P31276 AC090543.1-201ENST00000492168 485 ntBASIC5.3□□□□□ -1.56
HOXC13P31276 RPL23AP72-201ENST00000492447 435 ntBASIC5.3□□□□□ -1.56
HOXC13P31276 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC13P31276 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC13P31276 GCSHP4-201ENST00000538792 439 ntBASIC5.3□□□□□ -1.56
HOXC13P31276 AC006518.1-201ENST00000541449 943 ntBASIC5.3□□□□□ -1.56
HOXC13P31276 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.3□□□□□ -1.56
HOXC13P31276 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC13P31276 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXC13P31276 BNIP3P35-201ENST00000604530 490 ntBASIC5.3□□□□□ -1.56
HOXC13P31276 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC13P31276 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC13P31276 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.3□□□□□ -1.56
HOXC13P31276 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.3□□□□□ -1.56
HOXC13P31276 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
HOXC13P31276 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HOXC13P31276 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC13P31276 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC13P31276 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC13P31276 Z98755.1-201ENST00000407015 1384 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HOXC13P31276 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXC13P31276 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC13P31276 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC13P31276 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC13P31276 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXC13P31276 AC022417.1-201ENST00000624768 1303 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXC13P31276 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC13P31276 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
HOXC13P31276 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC13P31276 TCP1P3-201ENST00000414406 1498 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 RN7SKP74-201ENST00000362849 309 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 RN7SKP149-201ENST00000363008 344 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 RN7SKP113-201ENST00000363891 295 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 RNU6-883P-201ENST00000384597 107 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HOXC13P31276 AL390316.1-201ENST00000406279 553 ntBASIC5.29□□□□□ -1.56
HOXC13P31276 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC13P31276 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC13P31276 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC13P31276 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC13P31276 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXC13P31276 NDUFA12P1-201ENST00000455914 406 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms