Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL450345.1-202ENST00000605741 3881 ntBASIC4.93□□□□□ -1.62
HOXA9P31269 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXA9P31269 RAD17P1-201ENST00000418130 2042 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA9P31269 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA9P31269 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HOXA9P31269 AC000374.1-201ENST00000434698 1745 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HOXA9P31269 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
HOXA9P31269 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXA9P31269 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXA9P31269 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HOXA9P31269 RNA5SP509-201ENST00000364577 119 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 RNU6-729P-201ENST00000384399 107 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 RNU6-233P-201ENST00000410845 141 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 AC013429.2-201ENST00000418798 781 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 GAPDHP49-201ENST00000421421 961 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 AC104333.2-201ENST00000422630 192 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXA9P31269 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXA9P31269 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXA9P31269 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXA9P31269 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXA9P31269 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA9P31269 AC105031.1-201ENST00000518550 476 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 AP000827.1-201ENST00000527814 258 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXA9P31269 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXA9P31269 AC093249.4-201ENST00000564755 259 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA9P31269 AC009704.2-201ENST00000618739 483 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 BX005214.3-202ENST00000619809 325 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 AC011815.3-201ENST00000624194 473 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXA9P31269 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HOXA9P31269 AL672167.1-204ENST00000641875 3017 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA9P31269 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA9P31269 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA9P31269 AL022393.1-201ENST00000625142 1677 ntBASIC4.92□□□□□ -1.62
HOXA9P31269 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
HOXA9P31269 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXA9P31269 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
HOXA9P31269 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA9P31269 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA9P31269 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXA9P31269 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXA9P31269 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXA9P31269 AC104260.2-201ENST00000623551 3497 ntBASIC4.91□□□□□ -1.62
HOXA9P31269 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXA9P31269 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXA9P31269 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HOXA9P31269 A2MP1-204ENST00000566278 4130 ntBASIC4.91□□□□□ -1.62
HOXA9P31269 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXA9P31269 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA9P31269 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXA9P31269 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA9P31269 RN7SKP227-201ENST00000364445 330 ntBASIC4.91□□□□□ -1.62
HOXA9P31269 AC007738.1-201ENST00000413892 348 ntBASIC4.91□□□□□ -1.62
HOXA9P31269 AC013268.2-201ENST00000420753 337 ntBASIC4.91□□□□□ -1.62
HOXA9P31269 RPSAP41-201ENST00000439695 860 ntBASIC4.91□□□□□ -1.62
HOXA9P31269 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.91□□□□□ -1.62
HOXA9P31269 AC090142.1-201ENST00000465776 462 ntBASIC4.91□□□□□ -1.62
HOXA9P31269 AC011276.1-201ENST00000469688 323 ntBASIC4.91□□□□□ -1.62
HOXA9P31269 AC007016.1-201ENST00000512110 244 ntBASIC4.91□□□□□ -1.62
HOXA9P31269 RNU6-513P-201ENST00000516104 104 ntBASIC4.91□□□□□ -1.62
HOXA9P31269 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA9P31269 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXA9P31269 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXA9P31269 AC073137.1-201ENST00000605636 634 ntBASIC4.91□□□□□ -1.62
HOXA9P31269 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXA9P31269 AC012409.3-201ENST00000611343 981 ntBASIC4.91□□□□□ -1.62
HOXA9P31269 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXA9P31269 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXA9P31269 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXA9P31269 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
HOXA9P31269 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXA9P31269 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXA9P31269 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
HOXA9P31269 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
HOXA9P31269 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HOXA9P31269 AL121950.1-201ENST00000624993 2077 ntBASIC4.9□□□□□ -1.62
HOXA9P31269 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HOXA9P31269 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.9□□□□□ -1.62
HOXA9P31269 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.9□□□□□ -1.62
HOXA9P31269 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
HOXA9P31269 TCP1P3-201ENST00000414406 1498 ntBASIC4.9□□□□□ -1.62
HOXA9P31269 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HOXA9P31269 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.9□□□□□ -1.62
HOXA9P31269 AC063976.2-201ENST00000425667 3556 ntBASIC4.9□□□□□ -1.62
HOXA9P31269 OR4K17-201ENST00000315543 1032 ntBASIC4.9□□□□□ -1.63
HOXA9P31269 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXA9P31269 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXA9P31269 GTF2IP2-201ENST00000424290 697 ntBASIC4.9□□□□□ -1.63
HOXA9P31269 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXA9P31269 RNA5SP464-201ENST00000516251 108 ntBASIC4.9□□□□□ -1.63
HOXA9P31269 RN7SKP21-201ENST00000516503 220 ntBASIC4.9□□□□□ -1.63
HOXA9P31269 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXA9P31269 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms