Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 MTHFD2P5-201ENST00000320415 844 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 RNU1-20P-201ENST00000363314 162 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 SETP15-201ENST00000412724 337 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 VDAC1P9-201ENST00000412766 841 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 SNRPFP1-201ENST00000414761 252 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 ARAFP1-201ENST00000422172 605 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 RPL23AP1-201ENST00000428990 471 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 RPL21P126-201ENST00000470049 478 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 AC125612.1-201ENST00000547580 377 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 RPL21P7-201ENST00000557463 483 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 AL390726.5-202ENST00000564800 256 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 AC084783.1-201ENST00000565846 910 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 AC115286.1-201ENST00000604298 434 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 AL160290.3-201ENST00000604869 165 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 AL353726.1-201ENST00000614041 1000 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 MIR6891-201ENST00000618788 93 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 OR4G1P-202ENST00000641173 1788 ntBASIC4.54□□□□□ -1.68
HLA-DQB2P05538 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 A2MP1-204ENST00000566278 4130 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 RNU1-130P-201ENST00000363930 160 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 MIR192-201ENST00000384915 110 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 AC062016.2-201ENST00000420950 676 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 RPL23AP25-201ENST00000430973 463 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 FTH1P16-201ENST00000435241 552 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 AL138878.2-201ENST00000440581 1241 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 DDX39BP2-208ENST00000453923 258 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 RPS29P33-201ENST00000456717 146 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 AC090013.1-201ENST00000485147 480 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 AC108022.1-201ENST00000493466 478 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 AP000827.1-201ENST00000527814 258 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 AP005119.2-201ENST00000579735 1105 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 RPL12P25-202ENST00000598100 674 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 AC008536.1-201ENST00000602872 669 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 AC073342.3-201ENST00000624211 193 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 AC006065.6-201ENST00000625201 545 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 OR56B2P-202ENST00000641377 2453 ntBASIC4.53□□□□□ -1.68
HLA-DQB2P05538 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HLA-DQB2P05538 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
HLA-DQB2P05538 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.53□□□□□ -1.69
HLA-DQB2P05538 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
HLA-DQB2P05538 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 RNU1-44P-201ENST00000384453 163 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 MIR129-1-201ENST00000384972 72 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 RPS3AP23-201ENST00000401762 784 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 AC002524.1-201ENST00000411687 547 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 SEPT7P8-201ENST00000413308 775 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 RPEP2-201ENST00000432149 701 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 NDUFA5P1-201ENST00000433858 341 ntBASIC4.52□□□□□ -1.69
HLA-DQB2P05538 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DQB2P05538 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms