Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 RNU6-317P-201ENST00000384031 107 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 GAPDHP42-201ENST00000406848 981 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AL133173.1-201ENST00000423458 397 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 HIGD1AP4-201ENST00000430194 280 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 RPL7P34-201ENST00000433316 712 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC090018.1-201ENST00000434369 367 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC002542.1-201ENST00000440683 193 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 OTX2P1-201ENST00000450956 354 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AL445665.1-202ENST00000452436 324 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 HMGB1P4-201ENST00000455362 567 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 UBFD1P1-201ENST00000473259 814 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 RPL23AP44-201ENST00000482216 473 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC073522.1-201ENST00000483312 377 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AL035404.1-201ENST00000497982 568 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 IGBP1P4-201ENST00000503202 879 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 RNA5SP473-201ENST00000516402 125 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 CDC42P3-201ENST00000518493 633 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 IGLVIV-64-201ENST00000518581 301 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 YWHABP2-201ENST00000540201 713 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC044913.1-201ENST00000557200 430 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC018552.1-201ENST00000562099 811 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 MIR5708-201ENST00000579723 85 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC108738.1-201ENST00000603703 237 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC007349.4-201ENST00000608114 532 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AP000238.1-201ENST00000608759 426 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC092954.1-201ENST00000609121 445 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AL096712.1-201ENST00000614561 159 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AC091304.6-201ENST00000619761 202 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AP002782.1-201ENST00000623107 614 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 AP002967.1-201ENST00000624203 539 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 MIR193BHG-214ENST00000641765 509 ntBASIC4.85□□□□□ -1.63
HLA-DQA2P01906 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.85□□□□□ -1.63
HLA-DQA2P01906 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 AC100757.1-201ENST00000616872 1835 ntBASIC4.84□□□□□ -1.63
HLA-DQA2P01906 AC000367.1-201ENST00000452711 1766 ntBASIC4.84□□□□□ -1.63
HLA-DQA2P01906 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 NSRP1P1-201ENST00000444067 1693 ntBASIC4.84□□□□□ -1.63
HLA-DQA2P01906 YES1P1-201ENST00000418510 1628 ntBASIC4.84□□□□□ -1.63
HLA-DQA2P01906 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 SNORD116.1-201ENST00000365628 92 ntBASIC4.84□□□□□ -1.63
HLA-DQA2P01906 RNU4-2-201ENST00000365668 141 ntBASIC4.84□□□□□ -1.63
HLA-DQA2P01906 RNU6-225P-201ENST00000384613 103 ntBASIC4.84□□□□□ -1.63
HLA-DQA2P01906 RN7SKP240-201ENST00000410583 375 ntBASIC4.84□□□□□ -1.63
HLA-DQA2P01906 AC048351.1-201ENST00000420064 602 ntBASIC4.84□□□□□ -1.63
HLA-DQA2P01906 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.84□□□□□ -1.63
HLA-DQA2P01906 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HLA-DQA2P01906 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms