Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.18□□□□□ -1.58
SMAD6O43541 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.18□□□□□ -1.58
SMAD6O43541 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.18□□□□□ -1.58
SMAD6O43541 MTCO3P27-201ENST00000514397 196 ntBASIC5.18□□□□□ -1.58
SMAD6O43541 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.18□□□□□ -1.58
SMAD6O43541 AC021451.1-201ENST00000523498 1129 ntBASIC5.18□□□□□ -1.58
SMAD6O43541 C1DP5-201ENST00000525775 383 ntBASIC5.18□□□□□ -1.58
SMAD6O43541 MTATP6P15-201ENST00000527233 835 ntBASIC5.18□□□□□ -1.58
SMAD6O43541 OR5AZ1P-201ENST00000527448 943 ntBASIC5.18□□□□□ -1.58
SMAD6O43541 AC027369.5-201ENST00000533838 755 ntBASIC5.18□□□□□ -1.58
SMAD6O43541 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.18□□□□□ -1.58
SMAD6O43541 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.18□□□□□ -1.58
SMAD6O43541 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.18□□□□□ -1.58
SMAD6O43541 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.18□□□□□ -1.58
SMAD6O43541 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.18□□□□□ -1.58
SMAD6O43541 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMAD6O43541 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.18□□□□□ -1.58
SMAD6O43541 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.18□□□□□ -1.58
SMAD6O43541 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.18□□□□□ -1.58
SMAD6O43541 AC234772.3-201ENST00000602277 528 ntBASIC5.18□□□□□ -1.58
SMAD6O43541 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.18□□□□□ -1.58
SMAD6O43541 AC069431.2-201ENST00000604149 1099 ntBASIC5.18□□□□□ -1.58
SMAD6O43541 AL445528.2-201ENST00000620582 470 ntBASIC5.18□□□□□ -1.58
SMAD6O43541 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.18□□□□□ -1.58
SMAD6O43541 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SMAD6O43541 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMAD6O43541 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.18□□□□□ -1.58
SMAD6O43541 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMAD6O43541 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SMAD6O43541 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMAD6O43541 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMAD6O43541 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SMAD6O43541 AC026523.2-201ENST00000625039 7739 ntBASIC5.18□□□□□ -1.58
SMAD6O43541 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.18□□□□□ -1.58
SMAD6O43541 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SMAD6O43541 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMAD6O43541 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMAD6O43541 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.18□□□□□ -1.58
SMAD6O43541 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMAD6O43541 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMAD6O43541 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SMAD6O43541 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
SMAD6O43541 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SMAD6O43541 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
SMAD6O43541 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SMAD6O43541 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SMAD6O43541 AL353625.1-202ENST00000366273 571 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SMAD6O43541 SNORA48.4-201ENST00000391089 134 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.17□□□□□ -1.58
SMAD6O43541 CHMP1B2P-201ENST00000399581 597 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 AL645733.1-201ENST00000402250 217 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.17□□□□□ -1.58
SMAD6O43541 RN7SKP125-201ENST00000410481 302 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 RPS26P13-201ENST00000419030 330 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 AJ239321.1-201ENST00000424255 564 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 HMGN2P27-201ENST00000427352 270 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 RPL12P28-201ENST00000430852 489 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 AC009238.2-201ENST00000431026 355 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 AL450263.2-201ENST00000439400 589 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 AL591719.1-201ENST00000444669 744 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.17□□□□□ -1.58
SMAD6O43541 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMAD6O43541 OR6C72P-201ENST00000451403 892 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 BX842559.2-201ENST00000451418 605 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.17□□□□□ -1.58
SMAD6O43541 C1DP3-201ENST00000455013 423 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 RN7SL443P-201ENST00000464331 290 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.17□□□□□ -1.58
SMAD6O43541 RPL23AP73-201ENST00000492507 471 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 AC010350.1-201ENST00000504908 231 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 AC020699.1-201ENST00000505161 445 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.17□□□□□ -1.58
SMAD6O43541 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.17□□□□□ -1.58
SMAD6O43541 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SMAD6O43541 RN7SKP260-201ENST00000516907 149 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 AC087894.1-201ENST00000538359 518 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMAD6O43541 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.17□□□□□ -1.58
SMAD6O43541 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.17□□□□□ -1.58
SMAD6O43541 MIR4436B2-201ENST00000581415 91 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 MIR4436B1-201ENST00000583272 91 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.17□□□□□ -1.58
SMAD6O43541 AC012557.2-201ENST00000605919 418 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 LINC00216-201ENST00000623548 1126 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.17□□□□□ -1.58
SMAD6O43541 AC004943.3-201ENST00000624116 600 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
SMAD6O43541 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.17□□□□□ -1.58
SMAD6O43541 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.17□□□□□ -1.58
SMAD6O43541 AL590396.4-201ENST00000636779 956 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SMAD6O43541 AC131971.1-201ENST00000332881 1482 ntBASIC5.17□□□□□ -1.58
SMAD6O43541 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMAD6O43541 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMAD6O43541 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.17□□□□□ -1.58
SMAD6O43541 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SMAD6O43541 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SMAD6O43541 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SMAD6O43541 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 210.4 ms