Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.42□□□□□ -1.54
PROM1O43490 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.42□□□□□ -1.54
PROM1O43490 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.42□□□□□ -1.54
PROM1O43490 AC090888.1-201ENST00000561335 1141 ntBASIC5.42□□□□□ -1.54
PROM1O43490 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.42□□□□□ -1.54
PROM1O43490 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.42□□□□□ -1.54
PROM1O43490 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PROM1O43490 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.42□□□□□ -1.54
PROM1O43490 OR2AS2P-201ENST00000606902 342 ntBASIC5.42□□□□□ -1.54
PROM1O43490 AP003392.5-201ENST00000607857 415 ntBASIC5.42□□□□□ -1.54
PROM1O43490 AL157770.1-201ENST00000623049 439 ntBASIC5.42□□□□□ -1.54
PROM1O43490 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
PROM1O43490 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.42□□□□□ -1.54
PROM1O43490 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
PROM1O43490 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.42□□□□□ -1.54
PROM1O43490 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PROM1O43490 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PROM1O43490 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PROM1O43490 AP005435.3-201ENST00000531260 3198 ntBASIC5.42□□□□□ -1.54
PROM1O43490 AC011933.2-201ENST00000578539 2790 ntBASIC5.42□□□□□ -1.54
PROM1O43490 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PROM1O43490 STX3-208ENST00000641815 3236 ntBASIC5.42□□□□□ -1.54
PROM1O43490 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PROM1O43490 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PROM1O43490 MTCO1P18-201ENST00000455518 1419 ntBASIC5.41□□□□□ -1.54
PROM1O43490 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PROM1O43490 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
PROM1O43490 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.41□□□□□ -1.54
PROM1O43490 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PROM1O43490 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.41□□□□□ -1.54
PROM1O43490 OR52B3P-201ENST00000314715 928 ntBASIC5.41□□□□□ -1.54
PROM1O43490 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.41□□□□□ -1.54
PROM1O43490 RNU1-136P-201ENST00000384181 164 ntBASIC5.41□□□□□ -1.54
PROM1O43490 RNU6-83P-201ENST00000384568 112 ntBASIC5.41□□□□□ -1.54
PROM1O43490 MIR142-201ENST00000384835 87 ntBASIC5.41□□□□□ -1.54
PROM1O43490 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PROM1O43490 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PROM1O43490 DNAJC19P6-201ENST00000401853 280 ntBASIC5.41□□□□□ -1.54
PROM1O43490 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.41□□□□□ -1.54
PROM1O43490 AC245060.4-201ENST00000413293 1121 ntBASIC5.41□□□□□ -1.54
PROM1O43490 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.41□□□□□ -1.54
PROM1O43490 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.41□□□□□ -1.54
PROM1O43490 AL035407.1-201ENST00000429211 571 ntBASIC5.41□□□□□ -1.54
PROM1O43490 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.41□□□□□ -1.54
PROM1O43490 USP9YP14-201ENST00000430663 563 ntBASIC5.41□□□□□ -1.54
PROM1O43490 MOB1AP1-201ENST00000430903 535 ntBASIC5.41□□□□□ -1.54
PROM1O43490 AL035458.1-201ENST00000433096 585 ntBASIC5.41□□□□□ -1.54
PROM1O43490 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.41□□□□□ -1.54
PROM1O43490 RPL5P25-201ENST00000441148 775 ntBASIC5.41□□□□□ -1.54
PROM1O43490 AC023512.1-201ENST00000444513 499 ntBASIC5.41□□□□□ -1.54
PROM1O43490 MTND2P4-201ENST00000445034 1004 ntBASIC5.41□□□□□ -1.54
PROM1O43490 HMGN1P36-201ENST00000446623 298 ntBASIC5.41□□□□□ -1.54
PROM1O43490 NPM1P39-201ENST00000449818 867 ntBASIC5.41□□□□□ -1.54
PROM1O43490 MTND4LP3-201ENST00000468320 276 ntBASIC5.41□□□□□ -1.54
PROM1O43490 RPL23AP44-201ENST00000482216 473 ntBASIC5.41□□□□□ -1.54
PROM1O43490 RPS7P6-201ENST00000485777 579 ntBASIC5.41□□□□□ -1.54
PROM1O43490 RPL32P33-201ENST00000487023 394 ntBASIC5.41□□□□□ -1.54
PROM1O43490 DUTP1-201ENST00000493631 470 ntBASIC5.41□□□□□ -1.54
PROM1O43490 NENFP3-201ENST00000503735 313 ntBASIC5.41□□□□□ -1.54
PROM1O43490 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.41□□□□□ -1.54
PROM1O43490 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.41□□□□□ -1.54
PROM1O43490 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.41□□□□□ -1.54
PROM1O43490 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.41□□□□□ -1.54
PROM1O43490 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.41□□□□□ -1.54
PROM1O43490 AC138832.1-201ENST00000522871 556 ntBASIC5.41□□□□□ -1.54
PROM1O43490 MTCO1P49-201ENST00000523429 802 ntBASIC5.41□□□□□ -1.54
PROM1O43490 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.41□□□□□ -1.54
PROM1O43490 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.41□□□□□ -1.54
PROM1O43490 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.41□□□□□ -1.54
PROM1O43490 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.41□□□□□ -1.54
PROM1O43490 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.41□□□□□ -1.54
PROM1O43490 AC007225.2-201ENST00000562529 256 ntBASIC5.41□□□□□ -1.54
PROM1O43490 AC009962.1-201ENST00000567327 3813 ntBASIC5.41□□□□□ -1.54
PROM1O43490 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.41□□□□□ -1.54
PROM1O43490 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.41□□□□□ -1.54
PROM1O43490 AP000255.1-201ENST00000610276 676 ntBASIC5.41□□□□□ -1.54
PROM1O43490 AL162574.1-201ENST00000615702 950 ntBASIC5.41□□□□□ -1.54
PROM1O43490 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.41□□□□□ -1.54
PROM1O43490 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.41□□□□□ -1.54
PROM1O43490 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.41□□□□□ -1.54
PROM1O43490 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.41□□□□□ -1.54
PROM1O43490 SAMMSON-209ENST00000641222 1100 ntBASIC5.41□□□□□ -1.54
PROM1O43490 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.41□□□□□ -1.54
PROM1O43490 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PROM1O43490 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.41□□□□□ -1.54
PROM1O43490 TRIM51GP-201ENST00000534741 1350 ntBASIC5.41□□□□□ -1.54
PROM1O43490 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PROM1O43490 TCP11X1-202ENST00000622971 1372 ntBASIC5.41□□□□□ -1.54
PROM1O43490 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.4□□□□□ -1.54
PROM1O43490 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PROM1O43490 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.4□□□□□ -1.54
PROM1O43490 FAM133CP-201ENST00000332869 704 ntBASIC5.4□□□□□ -1.54
PROM1O43490 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PROM1O43490 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PROM1O43490 MIR130A-201ENST00000385274 89 ntBASIC5.4□□□□□ -1.54
PROM1O43490 U3.25-201ENST00000391209 220 ntBASIC5.4□□□□□ -1.54
PROM1O43490 ATP5HP3-201ENST00000396994 486 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AL034403.1-201ENST00000399414 885 ntBASIC5.4□□□□□ -1.54
PROM1O43490 MTCO1P56-201ENST00000401674 224 ntBASIC5.4□□□□□ -1.54
PROM1O43490 AL138880.1-201ENST00000405824 642 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms