Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.32□□□□□ -1.56
MSI1O43347 HMGN2P25-201ENST00000486956 268 ntBASIC5.32□□□□□ -1.56
MSI1O43347 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.32□□□□□ -1.56
MSI1O43347 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.32□□□□□ -1.56
MSI1O43347 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.32□□□□□ -1.56
MSI1O43347 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.32□□□□□ -1.56
MSI1O43347 SNORA19.3-201ENST00000516165 130 ntBASIC5.32□□□□□ -1.56
MSI1O43347 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.32□□□□□ -1.56
MSI1O43347 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.32□□□□□ -1.56
MSI1O43347 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.32□□□□□ -1.56
MSI1O43347 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.32□□□□□ -1.56
MSI1O43347 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.32□□□□□ -1.56
MSI1O43347 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.32□□□□□ -1.56
MSI1O43347 AC022884.2-201ENST00000578535 580 ntBASIC5.32□□□□□ -1.56
MSI1O43347 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.32□□□□□ -1.56
MSI1O43347 AC093799.2-201ENST00000610062 578 ntBASIC5.32□□□□□ -1.56
MSI1O43347 AC037198.3-201ENST00000616754 526 ntBASIC5.32□□□□□ -1.56
MSI1O43347 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.32□□□□□ -1.56
MSI1O43347 AC068870.2-201ENST00000620635 389 ntBASIC5.32□□□□□ -1.56
MSI1O43347 AC105105.5-201ENST00000622635 1294 ntBASIC5.32□□□□□ -1.56
MSI1O43347 RPL23AP61-201ENST00000623642 466 ntBASIC5.32□□□□□ -1.56
MSI1O43347 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.32□□□□□ -1.56
MSI1O43347 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.32□□□□□ -1.56
MSI1O43347 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.32□□□□□ -1.56
MSI1O43347 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
MSI1O43347 HSPA8P18-201ENST00000439846 1928 ntBASIC5.32□□□□□ -1.56
MSI1O43347 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.32□□□□□ -1.56
MSI1O43347 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
MSI1O43347 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.32□□□□□ -1.56
MSI1O43347 AC073136.1-201ENST00000449426 2884 ntBASIC5.32□□□□□ -1.56
MSI1O43347 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
MSI1O43347 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
MSI1O43347 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
MSI1O43347 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.32□□□□□ -1.56
MSI1O43347 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
MSI1O43347 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.31□□□□□ -1.56
MSI1O43347 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.31□□□□□ -1.56
MSI1O43347 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
MSI1O43347 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MSI1O43347 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.31□□□□□ -1.56
MSI1O43347 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MSI1O43347 RN7SKP74-201ENST00000362849 309 ntBASIC5.31□□□□□ -1.56
MSI1O43347 RNU5B-4P-201ENST00000363508 111 ntBASIC5.31□□□□□ -1.56
MSI1O43347 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
MSI1O43347 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.31□□□□□ -1.56
MSI1O43347 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MSI1O43347 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
MSI1O43347 SNORA48.4-201ENST00000391089 134 ntBASIC5.31□□□□□ -1.56
MSI1O43347 EI24P3-201ENST00000399046 1062 ntBASIC5.31□□□□□ -1.56
MSI1O43347 AL390316.1-201ENST00000406279 553 ntBASIC5.31□□□□□ -1.56
MSI1O43347 XKRYP4-201ENST00000414395 483 ntBASIC5.31□□□□□ -1.56
MSI1O43347 DDX39BP1-205ENST00000422507 192 ntBASIC5.31□□□□□ -1.56
MSI1O43347 NDUFA5P10-201ENST00000432147 357 ntBASIC5.31□□□□□ -1.56
MSI1O43347 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.31□□□□□ -1.56
MSI1O43347 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MSI1O43347 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.31□□□□□ -1.56
MSI1O43347 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.31□□□□□ -1.56
MSI1O43347 TCEA1P3-201ENST00000443005 880 ntBASIC5.31□□□□□ -1.56
MSI1O43347 CEACAMP7-201ENST00000444105 496 ntBASIC5.31□□□□□ -1.56
MSI1O43347 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.31□□□□□ -1.56
MSI1O43347 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.31□□□□□ -1.56
MSI1O43347 XKRYP5-201ENST00000449659 483 ntBASIC5.31□□□□□ -1.56
MSI1O43347 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.31□□□□□ -1.56
MSI1O43347 RN7SL610P-201ENST00000463845 291 ntBASIC5.31□□□□□ -1.56
MSI1O43347 RN7SL329P-201ENST00000467740 299 ntBASIC5.31□□□□□ -1.56
MSI1O43347 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.31□□□□□ -1.56
MSI1O43347 AC010350.1-201ENST00000504908 231 ntBASIC5.31□□□□□ -1.56
MSI1O43347 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.31□□□□□ -1.56
MSI1O43347 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.31□□□□□ -1.56
MSI1O43347 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.31□□□□□ -1.56
MSI1O43347 AC092593.2-201ENST00000513866 913 ntBASIC5.31□□□□□ -1.56
MSI1O43347 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.31□□□□□ -1.56
MSI1O43347 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.31□□□□□ -1.56
MSI1O43347 NPM1P35-201ENST00000533043 868 ntBASIC5.31□□□□□ -1.56
MSI1O43347 AC027369.5-201ENST00000533838 755 ntBASIC5.31□□□□□ -1.56
MSI1O43347 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.31□□□□□ -1.56
MSI1O43347 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.31□□□□□ -1.56
MSI1O43347 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.31□□□□□ -1.56
MSI1O43347 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.31□□□□□ -1.56
MSI1O43347 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.31□□□□□ -1.56
MSI1O43347 AL022067.1-201ENST00000602426 454 ntBASIC5.31□□□□□ -1.56
MSI1O43347 AC105254.2-201ENST00000603636 436 ntBASIC5.31□□□□□ -1.56
MSI1O43347 AC099785.1-201ENST00000605697 437 ntBASIC5.31□□□□□ -1.56
MSI1O43347 VN1R9P-201ENST00000614184 867 ntBASIC5.31□□□□□ -1.56
MSI1O43347 BNIP3P41-202ENST00000616656 861 ntBASIC5.31□□□□□ -1.56
MSI1O43347 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.31□□□□□ -1.56
MSI1O43347 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.31□□□□□ -1.56
MSI1O43347 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.31□□□□□ -1.56
MSI1O43347 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
MSI1O43347 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
MSI1O43347 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
MSI1O43347 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MSI1O43347 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
MSI1O43347 NXF4-202ENST00000416098 1465 ntBASIC5.31□□□□□ -1.56
MSI1O43347 THAP12P4-201ENST00000528321 2266 ntBASIC5.31□□□□□ -1.56
MSI1O43347 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MSI1O43347 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
MSI1O43347 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.31□□□□□ -1.56
MSI1O43347 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
MSI1O43347 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms