Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC108751.2-201ENST00000469993 231 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC28A1O00337 UBA52P7-201ENST00000486088 380 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 OR9N1P-202ENST00000494289 481 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC28A1O00337 AC108471.1-201ENST00000513977 287 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC28A1O00337 IGKV3D-34-201ENST00000522638 302 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC28A1O00337 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SLC28A1O00337 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC28A1O00337 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC28A1O00337 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC28A1O00337 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC28A1O00337 AC011445.2-201ENST00000599274 173 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 AC010424.2-201ENST00000607594 443 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 AP000864.1-201ENST00000609424 650 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 AL627230.1-201ENST00000613077 211 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 AL591926.8-201ENST00000616876 211 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC28A1O00337 AP002967.1-201ENST00000624203 539 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC28A1O00337 AL359715.4-201ENST00000606629 1436 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC28A1O00337 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC28A1O00337 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC28A1O00337 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC28A1O00337 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC28A1O00337 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC28A1O00337 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC28A1O00337 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SLC28A1O00337 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC28A1O00337 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SLC28A1O00337 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC28A1O00337 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SLC28A1O00337 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SLC28A1O00337 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SLC28A1O00337 RNA5SP428-201ENST00000365129 132 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SLC28A1O00337 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SLC28A1O00337 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SLC28A1O00337 CHMP1B2P-201ENST00000399581 597 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC28A1O00337 VN1R37P-201ENST00000419096 748 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC28A1O00337 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC28A1O00337 CHEK2P5-201ENST00000423877 246 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AC006455.6-201ENST00000426192 893 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 MTND4LP7-201ENST00000431728 294 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC28A1O00337 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC28A1O00337 AL391987.1-201ENST00000441025 200 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AL163193.1-201ENST00000444895 788 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC28A1O00337 RPS18P6-201ENST00000476880 458 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AC117394.1-201ENST00000477323 567 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AC079841.1-201ENST00000481228 950 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 RN7SL558P-201ENST00000497468 299 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.67□□□□□ -1.66
SLC28A1O00337 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC28A1O00337 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC28A1O00337 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC28A1O00337 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SLC28A1O00337 AC092490.3-201ENST00000545370 572 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AL731537.2-201ENST00000561565 951 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AC021483.2-201ENST00000567415 758 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.67□□□□□ -1.66
SLC28A1O00337 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.67□□□□□ -1.66
SLC28A1O00337 AL137072.1-201ENST00000603444 466 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AL049844.2-201ENST00000604280 628 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AC096553.1-201ENST00000605169 829 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AC012557.1-201ENST00000607115 611 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SLC28A1O00337 MIR4302-201ENST00000638058 60 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SLC28A1O00337 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SLC28A1O00337 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SLC28A1O00337 SMG1P6-201ENST00000532337 2930 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SLC28A1O00337 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SLC28A1O00337 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SLC28A1O00337 PABPC1P6-201ENST00000445594 1829 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 AC126323.6-202ENST00000568092 3511 ntBASIC4.67□□□□□ -1.66
SLC28A1O00337 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SLC28A1O00337 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SLC28A1O00337 AL445487.1-201ENST00000415694 1580 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SLC28A1O00337 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC28A1O00337 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC28A1O00337 RNU1-83P-201ENST00000363426 164 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 SNORD115-48-201ENST00000364764 76 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 SNORA70-201ENST00000384436 135 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SLC28A1O00337 RNU6-244P-201ENST00000391028 104 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 RNA5SP498-201ENST00000411342 120 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 BMS1P13-201ENST00000417301 885 ntBASIC4.66□□□□□ -1.66
SLC28A1O00337 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.66□□□□□ -1.66
SLC28A1O00337 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SLC28A1O00337 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SLC28A1O00337 AL354710.1-201ENST00000453641 246 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms