Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
NPIPA3F8WFD2 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.63□□□□□ -1.67
NPIPA3F8WFD2 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.63□□□□□ -1.67
NPIPA3F8WFD2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA3F8WFD2 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.63□□□□□ -1.67
NPIPA3F8WFD2 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA3F8WFD2 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA3F8WFD2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA3F8WFD2 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
NPIPA3F8WFD2 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA3F8WFD2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA3F8WFD2 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPIPA3F8WFD2 AC015813.6-201ENST00000624409 5808 ntBASIC4.63□□□□□ -1.67
NPIPA3F8WFD2 AC104623.2-202ENST00000623477 4002 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AC093775.1-201ENST00000624154 1868 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 RN7SKP74-201ENST00000362849 309 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 MIR320B1-201ENST00000390209 79 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AL390316.1-201ENST00000406279 553 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 Y_RNA.625-201ENST00000411256 107 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 HYALP1-201ENST00000417674 1279 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AL450263.2-201ENST00000439400 589 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AC022431.1-201ENST00000450941 438 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 BX842559.2-201ENST00000451418 605 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 RPL23AP23-201ENST00000452590 471 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AL049829.1-201ENST00000465411 156 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 RPL7AP10-201ENST00000481016 791 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AC093890.1-201ENST00000502554 540 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AC016559.2-201ENST00000510759 359 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 VTA1P2-201ENST00000520205 911 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 OR4R2P-201ENST00000530815 597 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AC025918.2-201ENST00000558683 763 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AC022884.2-201ENST00000578535 580 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 MIR3908-201ENST00000579798 126 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AC104785.1-201ENST00000603220 588 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 MIR6820-201ENST00000611508 62 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AP004607.9-201ENST00000618202 316 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AP000720.1-201ENST00000625091 483 ntBASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA3F8WFD2 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 IRF5P1-201ENST00000504852 2164 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 RN7SKP113-201ENST00000363891 295 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 RNA5SP187-201ENST00000384400 119 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 SNORA66-201ENST00000384792 133 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 RPL21P67-201ENST00000402896 478 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 RPL12P9-201ENST00000412942 488 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 COX6B1P1-201ENST00000415962 213 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 CHEK2P3-201ENST00000416118 248 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 OR2AM1P-201ENST00000422137 422 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AL160175.1-201ENST00000428124 247 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 AL360081.1-201ENST00000428299 555 ntBASIC4.61□□□□□ -1.67
NPIPA3F8WFD2 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms