Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 Z98200.1-201ENST00000607298 470 ntBASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 AL445528.2-201ENST00000620582 470 ntBASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 LINC01808-202ENST00000641680 1116 ntBASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRAV27A0A087WT01 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 BTBD10P1-201ENST00000549824 1352 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 RN7SKP106-201ENST00000410832 272 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 RPS20P14-201ENST00000412545 360 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 RPEP2-201ENST00000432149 701 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 AL591623.2-201ENST00000449978 222 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 PSMC1P13-201ENST00000458195 985 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 RPS27AP17-201ENST00000463344 455 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 AC090589.1-201ENST00000473109 362 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 RPL12P20-201ENST00000475538 479 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 PCNPP1-201ENST00000552501 511 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 AC007066.2-202ENST00000566531 914 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 MIR4436B2-201ENST00000581415 91 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 MIR4436B1-201ENST00000583272 91 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 AC020634.1-201ENST00000608701 549 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 AC074140.1-201ENST00000621617 208 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 MIR6719-201ENST00000622428 87 ntBASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRAV27A0A087WT01 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.03□□□□□ -1.77
TRAV27A0A087WT01 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.77
TRAV27A0A087WT01 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 AC011503.2-201ENST00000594230 1500 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 RNA5SP307-201ENST00000362863 116 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 MIR298-201ENST00000401212 88 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 RN7SKP216-201ENST00000411050 312 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 ARAFP1-201ENST00000422172 605 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 NPM1P26-201ENST00000426339 738 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 AP001324.1-201ENST00000428553 399 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 SKP1P3-201ENST00000429280 487 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 AL049745.1-201ENST00000433953 286 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 RPL36AP15-201ENST00000444514 266 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 RPL23AP43-201ENST00000446445 471 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 VN1R32P-201ENST00000452234 905 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 AC018638.3-201ENST00000461273 132 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 RN7SL329P-201ENST00000467740 299 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 RN7SL176P-201ENST00000580352 264 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 AC006065.6-201ENST00000625201 545 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 AC021242.1-201ENST00000507315 2035 ntBASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.02□□□□□ -1.77
TRAV27A0A087WT01 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TRAV27A0A087WT01 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRAV27A0A087WT01 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TRAV27A0A087WT01 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRAV27A0A087WT01 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRAV27A0A087WT01 RNU4-44P-201ENST00000363050 141 ntBASIC4.01□□□□□ -1.77
TRAV27A0A087WT01 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRAV27A0A087WT01 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TRAV27A0A087WT01 MIR105-2-201ENST00000385083 81 ntBASIC4.01□□□□□ -1.77
TRAV27A0A087WT01 SDHCP2-201ENST00000398565 501 ntBASIC4.01□□□□□ -1.77
TRAV27A0A087WT01 VDAC2P1-201ENST00000399358 958 ntBASIC4.01□□□□□ -1.77
TRAV27A0A087WT01 VN1R8P-201ENST00000407739 893 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms