Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 AP003080.1-202ENST00000526526 915 ntBASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 AC009117.1-201ENST00000563948 554 ntBASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 uc_338.5-201ENST00000611839 155 ntBASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 U1.31-201ENST00000620022 160 ntBASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.9□□□□□ -1.3
PCDHGA11Q9Y5H2 MTND4P27-201ENST00000450813 1354 ntBASIC6.9□□□□□ -1.31
PCDHGA11Q9Y5H2 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.31
PCDHGA11Q9Y5H2 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.9□□□□□ -1.31
PCDHGA11Q9Y5H2 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHGA11Q9Y5H2 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
PCDHGA11Q9Y5H2 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
PCDHGA11Q9Y5H2 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHGA11Q9Y5H2 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHGA11Q9Y5H2 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHGA11Q9Y5H2 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHGA11Q9Y5H2 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.9□□□□□ -1.31
PCDHGA11Q9Y5H2 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHGA11Q9Y5H2 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHGA11Q9Y5H2 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
PCDHGA11Q9Y5H2 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AC007993.1-201ENST00000621298 2430 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 Y_RNA.67-201ENST00000362870 100 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 RNU6-456P-201ENST00000384493 107 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 RPS4XP8-201ENST00000402039 771 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AL122016.1-201ENST00000403365 367 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 MTCO2P5-201ENST00000422621 426 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 RPS21P1-201ENST00000434479 247 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AC092601.1-201ENST00000444526 383 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 SBDSP1-204ENST00000453858 737 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 RN7SL91P-201ENST00000469313 291 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 RN7SL182P-201ENST00000496499 300 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 RN7SL775P-201ENST00000498361 336 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AC026427.2-201ENST00000506228 536 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 HSPE1P2-201ENST00000554777 306 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AL109766.1-201ENST00000555080 552 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 PSMA3P-201ENST00000555485 635 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 ULK4P3-201ENST00000563895 440 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 ULK4P1-202ENST00000565174 503 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AC243312.1-201ENST00000570582 275 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 MIR5705-201ENST00000579870 89 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AC017100.2-201ENST00000584628 355 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AC010463.3-201ENST00000594077 500 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 uc_338.9-201ENST00000617424 182 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 RMST_7.1-201ENST00000621935 268 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 ERCC6-202ENST00000374127 1782 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 AL161901.1-201ENST00000624954 3425 ntBASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDHGA11Q9Y5H2 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDHGA11Q9Y5H2 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms