Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 DPPA2P1-201ENST00000428060 556 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AL136231.1-201ENST00000429407 730 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AC129850.1-201ENST00000436203 508 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 LINC02210-201ENST00000444561 288 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AC234781.3-201ENST00000452540 973 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 MEMO1P4-201ENST00000453590 386 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 UBFD1P1-201ENST00000473259 814 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AC093890.1-201ENST00000502554 540 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AC021146.8-201ENST00000507455 733 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 OR5H7P-201ENST00000514084 930 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 RNU6-1334P-201ENST00000516032 105 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 SCARNA18.1-201ENST00000516330 83 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 RNU6-720P-201ENST00000516363 108 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 MTND4LP26-201ENST00000518144 282 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 NPM1P52-201ENST00000518264 846 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AL133241.1-201ENST00000556832 487 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 MIR4789-201ENST00000577469 82 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 RN7SL622P-201ENST00000585292 275 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AL020997.3-201ENST00000602843 359 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AC010738.1-201ENST00000604970 987 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 VN1R74P-201ENST00000613259 503 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AL359740.1-201ENST00000624340 592 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AC129915.3-201ENST00000634128 948 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AC144833.1-201ENST00000567953 4089 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 FAM133CP-201ENST00000332869 704 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 RNU6-224P-201ENST00000384055 107 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 HSPD1P16-201ENST00000402302 394 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 RPL7P27-201ENST00000403775 720 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 AL590084.1-201ENST00000407885 387 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 AC092638.1-201ENST00000411966 1275 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 BX119321.1-201ENST00000428912 797 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 AL606490.7-201ENST00000433136 191 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 AL590399.4-201ENST00000436561 601 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 AL445466.1-201ENST00000448432 357 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 OR7E116P-201ENST00000448529 957 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 AC005077.1-201ENST00000449226 375 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 AC097262.1-201ENST00000452559 548 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 CST12P-201ENST00000457644 362 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 SNORD125-201ENST00000459538 96 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 AC006499.4-201ENST00000510947 694 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 RNU2-30P-201ENST00000516209 141 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 KCTD9P6-201ENST00000522306 950 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 OR5AM1P-201ENST00000532136 1032 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 AC010547.7-201ENST00000570323 333 ntBASIC5.42□□□□□ -1.54
PACSIN3Q9UKS6 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms