Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC098935.2-201ENST00000604222 466 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 AF117829.2-201ENST00000619538 361 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 AP001005.3-201ENST00000622049 129 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 AC091905.2-201ENST00000623143 306 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 A2MP1-204ENST00000566278 4130 ntBASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
VPS29Q9UBQ0 AC000123.3-201ENST00000624029 4975 ntBASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 CASC19-204ENST00000641001 2055 ntBASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 KARSP3-201ENST00000571212 1504 ntBASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 MIR323B-201ENST00000385269 82 ntBASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 RPS3AP41-201ENST00000462701 778 ntBASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 RN7SL41P-201ENST00000476144 297 ntBASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 DEFB109F-201ENST00000491870 277 ntBASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 AC007016.1-201ENST00000512110 244 ntBASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 BRD9P1-201ENST00000529855 560 ntBASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 UBE2FP2-201ENST00000566646 462 ntBASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 AC091042.1-201ENST00000579213 173 ntBASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 BNIP3P32-201ENST00000600015 554 ntBASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 DDX18P4-201ENST00000511690 1966 ntBASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS29Q9UBQ0 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 CR382285.2-201ENST00000624662 1495 ntBASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AL590240.1-201ENST00000334118 313 ntBASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 RNA5SP372-201ENST00000390836 115 ntBASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 SDHCP2-201ENST00000398565 501 ntBASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC004448.2-201ENST00000422360 586 ntBASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC104837.2-201ENST00000427236 424 ntBASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC008072.1-201ENST00000434254 824 ntBASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 RPS3AP53-201ENST00000454716 778 ntBASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC005008.1-201ENST00000456151 612 ntBASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC011005.3-201ENST00000491624 395 ntBASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 OR1F2P-201ENST00000570470 933 ntBASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC073091.2-201ENST00000603205 907 ntBASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC211433.2-201ENST00000608433 387 ntBASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 AC093775.1-201ENST00000624154 1868 ntBASIC4.37□□□□□ -1.71
VPS29Q9UBQ0 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS29Q9UBQ0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms