Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 AL163193.1-201ENST00000444895 788 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 AC112492.1-201ENST00000449607 712 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 NPM1P13-201ENST00000452663 865 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 RPS6P2-201ENST00000454208 705 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 SLC25A51P1-201ENST00000468432 871 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LRFN1Q9P244 SIAH1P1-201ENST00000479411 923 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 AC069528.1-202ENST00000482888 637 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 TRBV5-2-201ENST00000489095 273 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 AC108693.1-201ENST00000496068 432 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 NRBF2P4-201ENST00000520874 850 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 AL121594.2-201ENST00000541658 472 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 SUMO2P15-201ENST00000604285 278 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 AC009974.1-201ENST00000608881 455 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 AC015804.1-201ENST00000622935 435 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 AC006963.1-201ENST00000624003 1052 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 CASC19-248ENST00000641674 1356 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRFN1Q9P244 MRRFP1-201ENST00000435941 1675 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 AL161756.3-201ENST00000641216 2071 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRFN1Q9P244 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRFN1Q9P244 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LRFN1Q9P244 AC005224.3-201ENST00000584683 2140 ntBASIC5.23□□□□□ -1.57
LRFN1Q9P244 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
LRFN1Q9P244 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 AL034370.1-201ENST00000397254 1590 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 RNU6-619P-201ENST00000365146 108 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 SNORD116-12-201ENST00000384468 92 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 GAPDHP42-201ENST00000406848 981 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 RNU4-22P-201ENST00000411058 166 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 OR51A3P-201ENST00000413596 924 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 Z75741.2-201ENST00000417272 1167 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 VN1R25P-201ENST00000443385 738 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 SPRYD7P1-201ENST00000443861 570 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 AL589880.1-201ENST00000448271 287 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 MEMO1P4-201ENST00000453590 386 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 snoU13.29-201ENST00000459370 104 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 RN7SL610P-201ENST00000463845 291 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 RPS27P23-201ENST00000487608 251 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 BX510359.5-201ENST00000515651 304 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 RN7SKP265-201ENST00000516448 223 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRFN1Q9P244 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 AC126615.2-201ENST00000553003 515 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 AL442163.2-201ENST00000553912 710 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 AC110743.1-201ENST00000584870 478 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.22□□□□□ -1.57
LRFN1Q9P244 AL445435.1-201ENST00000604232 665 ntBASIC5.22□□□□□ -1.57
LRFN1Q9P244 AP004247.3-201ENST00000608682 624 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms