Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC007618.1-201ENST00000366455 732 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 MIR550A3-201ENST00000390735 95 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 RNU1-149P-201ENST00000390870 161 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 CHMP1B2P-201ENST00000399581 597 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 RPS3AP25-201ENST00000411660 793 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 CTSL3P-202ENST00000412179 788 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 NPM1P40-201ENST00000412758 733 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 AC106883.1-201ENST00000418805 562 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 RPL12P3-201ENST00000440080 396 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 PRPF38AP1-201ENST00000451976 933 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 RPL32P14-201ENST00000463196 378 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 RPL7P40-201ENST00000481703 745 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 AC107398.1-201ENST00000486904 505 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 AC008953.1-201ENST00000497334 318 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 AL049870.4-201ENST00000555741 486 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 PRPF19P1-201ENST00000584766 898 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 AC009948.4-201ENST00000604692 675 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 AL049539.1-201ENST00000611964 459 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 AC007275.1-201ENST00000621243 671 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 AC007382.1-201ENST00000624376 2618 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 ADAM5-202ENST00000399789 1942 ntBASIC5.31□□□□□ -1.56
NCKIPSDQ9NZQ3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AC011493.1-201ENST00000596753 1632 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 RLIMP2-201ENST00000427891 1563 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 RNA5SP443-201ENST00000363083 132 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 DBIP1-201ENST00000401435 260 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AL589647.1-201ENST00000402485 466 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 RPL21P67-201ENST00000402896 478 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AC124944.2-201ENST00000429866 1242 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 GSTM5P1-201ENST00000434751 660 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AL096829.2-201ENST00000446582 742 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AC073850.1-201ENST00000449243 255 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 HMGB1P5-202ENST00000451497 985 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 PSMC1P13-201ENST00000458195 985 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 TPT1P1-201ENST00000458495 518 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AC098862.1-201ENST00000504991 413 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 OR8A2P-201ENST00000528631 952 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AC027369.5-201ENST00000533838 755 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 GLRXP2-201ENST00000555594 321 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AC127381.1-201ENST00000555979 939 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 MIR4472-2-201ENST00000582069 67 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 RN7SL356P-201ENST00000582228 248 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AP005262.1-201ENST00000582646 997 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AC006272.2-201ENST00000594725 163 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AL451049.1-201ENST00000608672 497 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AC090527.3-201ENST00000619041 548 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AC084824.4-201ENST00000620106 731 ntBASIC5.3□□□□□ -1.56
NCKIPSDQ9NZQ3 AP003400.3-201ENST00000624904 346 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms