Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC097499.1-201ENST00000444277 208 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AC005229.2-201ENST00000456995 399 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AC104687.1-201ENST00000485829 412 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AC109462.1-201ENST00000491087 368 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 NPM1P28-201ENST00000492269 840 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 RPS4XP14-201ENST00000493072 781 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 RN7SL244P-201ENST00000493405 297 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AC110775.1-201ENST00000513721 462 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 RNU6-467P-201ENST00000517027 110 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AC005868.1-201ENST00000536421 331 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 MTND4LP25-201ENST00000570218 163 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 RPL21P136-201ENST00000605378 396 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AC097372.4-201ENST00000625025 466 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 MRRFP1-201ENST00000435941 1675 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 AL451142.2-201ENST00000429076 2090 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 GTF2H2B-203ENST00000508065 1432 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 MTND5P11-201ENST00000511037 1812 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 SOCS5P3-201ENST00000425115 1576 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.55□□□□□ -1.52
BLOC1S4Q9NUP1 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AL118496.1-201ENST00000440201 1812 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 SNORA73.1-201ENST00000363107 205 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 Y_RNA.110-201ENST00000363220 99 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 RNU6-609P-201ENST00000365459 107 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AC013404.1-201ENST00000413068 249 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AF186996.5-201ENST00000418098 904 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 MTCYBP21-201ENST00000443300 1113 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AC017099.1-201ENST00000448261 1028 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AC073850.1-201ENST00000449243 255 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 RPSAP50-201ENST00000481955 852 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 RN7SL808P-201ENST00000496066 299 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AL671862.1-201ENST00000515851 349 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 SCARNA21.2-201ENST00000516600 166 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 RN7SKP147-201ENST00000517154 244 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AP006245.2-201ENST00000522004 300 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 CIR1P1-201ENST00000524055 1133 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AP003049.1-201ENST00000529418 457 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 OR10G5P-201ENST00000532733 358 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AC092474.3-201ENST00000603022 568 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AC011453.2-201ENST00000603737 729 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AL121612.2-201ENST00000612261 482 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 SAMMSON-227ENST00000642114 1199 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AL450326.2-201ENST00000421913 1962 ntBASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BLOC1S4Q9NUP1 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 RNU4-4P-201ENST00000364588 130 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 MIR142-201ENST00000384835 87 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 SNORA68.2-201ENST00000391263 128 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.53□□□□□ -1.52
BLOC1S4Q9NUP1 RNU4-34P-201ENST00000410431 124 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms