Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC011005.3-201ENST00000491624 395 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 AC007016.1-201ENST00000512110 244 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 BRD9P1-201ENST00000529855 560 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 CYCSP28-201ENST00000534284 321 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 PCNPP1-201ENST00000552501 511 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 RPL21P7-201ENST00000557463 483 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 SULT1C2P2-201ENST00000562517 294 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 ATP5J2P6-201ENST00000565203 266 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 AC091042.1-201ENST00000579213 173 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 SNORD39.2-201ENST00000579995 76 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 AC233702.9-201ENST00000581528 203 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 HMGB2P1-201ENST00000591146 634 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 AL445528.2-201ENST00000620582 470 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 HSPA8P17-201ENST00000427029 1382 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 AC010928.1-201ENST00000592477 1447 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 MAPK10-286ENST00000641208 8747 ntBASIC4.61□□□□□ -1.67
TREX1Q9NSU2 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TREX1Q9NSU2 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 AL590240.1-201ENST00000334118 313 ntBASIC4.6□□□□□ -1.67
TREX1Q9NSU2 RN7SKP115-201ENST00000363177 317 ntBASIC4.6□□□□□ -1.67
TREX1Q9NSU2 RNU6-178P-201ENST00000384631 104 ntBASIC4.6□□□□□ -1.67
TREX1Q9NSU2 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 SNORA81-201ENST00000408493 178 ntBASIC4.6□□□□□ -1.67
TREX1Q9NSU2 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 AC008072.1-201ENST00000434254 824 ntBASIC4.6□□□□□ -1.67
TREX1Q9NSU2 NPM1P33-201ENST00000438918 872 ntBASIC4.6□□□□□ -1.67
TREX1Q9NSU2 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 PTMAP3-201ENST00000447474 330 ntBASIC4.6□□□□□ -1.67
TREX1Q9NSU2 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.6□□□□□ -1.67
TREX1Q9NSU2 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 AL390726.5-202ENST00000564800 256 ntBASIC4.6□□□□□ -1.67
TREX1Q9NSU2 MIR3934-201ENST00000579806 107 ntBASIC4.6□□□□□ -1.67
TREX1Q9NSU2 AC091178.1-203ENST00000584586 279 ntBASIC4.6□□□□□ -1.67
TREX1Q9NSU2 AC013244.1-201ENST00000604279 193 ntBASIC4.6□□□□□ -1.67
TREX1Q9NSU2 AC023813.4-201ENST00000607580 580 ntBASIC4.6□□□□□ -1.67
TREX1Q9NSU2 U3.53-201ENST00000628922 216 ntBASIC4.6□□□□□ -1.67
TREX1Q9NSU2 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.6□□□□□ -1.67
TREX1Q9NSU2 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
TREX1Q9NSU2 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 AC021146.4-201ENST00000309229 279 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 RNU1-20P-201ENST00000363314 162 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 Z98745.1-201ENST00000402553 494 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 SEPT7P8-201ENST00000413308 775 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 MTND4LP21-201ENST00000415303 295 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 AC092324.1-201ENST00000468671 324 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 AC104763.1-201ENST00000475274 360 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 RN7SL817P-201ENST00000480777 288 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 AC093270.2-201ENST00000486157 792 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 MTND4LP2-201ENST00000502312 285 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 NDUFA5P12-201ENST00000503796 343 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 OR7H2P-201ENST00000513483 306 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 OR5M2P-201ENST00000529003 936 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 MTND2P17-201ENST00000550281 688 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.59□□□□□ -1.67
TREX1Q9NSU2 BNIP3P32-201ENST00000600015 554 ntBASIC4.59□□□□□ -1.67
TREX1Q9NSU2 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms