Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RSU1P3-201ENST00000412878 835 ntBASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 OR13Z1P-201ENST00000416141 834 ntBASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 P2RY10P2-201ENST00000416730 913 ntBASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 Z74021.1-201ENST00000423610 407 ntBASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 AP006289.1-201ENST00000538089 277 ntBASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 MIR4737-201ENST00000583979 81 ntBASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 BNIP3P22-201ENST00000593399 556 ntBASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 AC005520.3-201ENST00000602874 370 ntBASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
UPF3BQ9BZI7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 DDX18P6-201ENST00000450119 1997 ntBASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 RANP7-201ENST00000418085 644 ntBASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 AC092570.3-201ENST00000420113 693 ntBASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 AC012519.1-201ENST00000424588 610 ntBASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 AC073264.2-201ENST00000448886 166 ntBASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 BTG4P1-201ENST00000510421 183 ntBASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 IGKV1-32-201ENST00000519290 311 ntBASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 OR10D4P-201ENST00000525892 951 ntBASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 AP001880.2-201ENST00000538233 448 ntBASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 AC105129.1-201ENST00000560250 297 ntBASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 AL031320.1-201ENST00000604177 357 ntBASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 TMEM30CP-203ENST00000637814 1035 ntBASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UPF3BQ9BZI7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 TTC39DP-201ENST00000416781 1688 ntBASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 AC108751.5-201ENST00000492880 1336 ntBASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 CYCSP11-201ENST00000436426 315 ntBASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 AL356390.1-201ENST00000455684 397 ntBASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 SCARNA22-201ENST00000503991 125 ntBASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 RNU1-6P-201ENST00000516290 144 ntBASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 RNU6-964P-201ENST00000516524 69 ntBASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 AC009117.1-201ENST00000563948 554 ntBASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 AC092653.1-201ENST00000608509 531 ntBASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 AC132825.1-201ENST00000463573 2247 ntBASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
UPF3BQ9BZI7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 RN7SKP97-201ENST00000410966 333 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms