Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.25□□□□□ -1.73
RSPO3Q9BXY4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
RSPO3Q9BXY4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RSPO3Q9BXY4 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RSPO3Q9BXY4 AC245100.2-201ENST00000454544 1679 ntBASIC4.25□□□□□ -1.73
RSPO3Q9BXY4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RSPO3Q9BXY4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RSPO3Q9BXY4 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.25□□□□□ -1.73
RSPO3Q9BXY4 UGT2B26P-201ENST00000508672 1613 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 RN7SKP199-201ENST00000410325 305 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AL807761.1-201ENST00000417622 171 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 PA2G4P6-201ENST00000438325 1197 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 CEACAMP9-201ENST00000442990 513 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 RPL21P133-201ENST00000443666 476 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AC114982.2-201ENST00000461396 358 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 FTH1P2-201ENST00000466086 412 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AC090013.1-201ENST00000485147 480 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 ARL4AP1-201ENST00000503220 705 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AC007016.1-201ENST00000512110 244 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 OR7H2P-201ENST00000513483 306 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 RN7SKP276-201ENST00000516242 268 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 OR5M2P-201ENST00000529003 936 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 CYCSP28-201ENST00000534284 321 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 EDDM3DP-201ENST00000554692 434 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 MIR4436B2-201ENST00000581415 91 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AC233702.9-201ENST00000581528 203 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 MIR4436B1-201ENST00000583272 91 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 SLC25A36P1-201ENST00000590111 465 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AC023762.1-201ENST00000603280 584 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AL137072.1-201ENST00000603444 466 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AL031320.1-201ENST00000604177 357 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AL391358.1-201ENST00000605342 190 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AC026979.4-201ENST00000606555 645 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AL445528.2-201ENST00000620582 470 ntBASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO3Q9BXY4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 SEPT7P8-201ENST00000413308 775 ntBASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 COX6B1P1-201ENST00000415962 213 ntBASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 PTP4A1P1-201ENST00000420539 515 ntBASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 USP9YP9-201ENST00000429406 715 ntBASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 CDY14P-201ENST00000431260 1014 ntBASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 BTG3P1-201ENST00000435859 716 ntBASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 CDY12P-201ENST00000440679 1015 ntBASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 CDY13P-201ENST00000445813 1015 ntBASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 AL935212.3-201ENST00000450729 284 ntBASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 CDY23P-201ENST00000451661 1014 ntBASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 IGLV3-26-201ENST00000520756 302 ntBASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 BRD9P1-201ENST00000529855 560 ntBASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 MIR4480-201ENST00000582492 71 ntBASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.23□□□□□ -1.73
RSPO3Q9BXY4 AL034374.2-201ENST00000605281 548 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms