Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 DDX18P4-201ENST00000511690 1966 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 IL6STP1-201ENST00000346911 1020 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 RN7SKP216-201ENST00000411050 312 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 LINC00993-201ENST00000420453 540 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 AL645608.4-201ENST00000423619 154 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 PPIAP13-201ENST00000434706 478 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 OR52J1P-201ENST00000450596 932 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 AC005008.1-201ENST00000456151 612 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 RPL21P6-201ENST00000479171 504 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 RN7SL817P-201ENST00000480777 288 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 ARL4AP1-201ENST00000503220 705 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 GAPDHP56-201ENST00000506031 988 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 RPL21P7-201ENST00000557463 483 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 ATP5J2P6-201ENST00000565203 266 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 MIR4737-201ENST00000583979 81 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 AC124856.1-201ENST00000600819 896 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 VN1R81P-201ENST00000602085 372 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 AC011453.2-201ENST00000603737 729 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 AC026979.4-201ENST00000606555 645 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 AP001005.3-201ENST00000622049 129 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 AC099654.2-201ENST00000433031 1980 ntBASIC4.82□□□□□ -1.64
C9orf72Q96LT7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
C9orf72Q96LT7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 CUL4AP1-201ENST00000514750 1863 ntBASIC4.81□□□□□ -1.64
C9orf72Q96LT7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 AC000123.3-201ENST00000624029 4975 ntBASIC4.81□□□□□ -1.64
C9orf72Q96LT7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 SDAD1P1-202ENST00000524156 2051 ntBASIC4.81□□□□□ -1.64
C9orf72Q96LT7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 OR56B2P-201ENST00000317102 954 ntBASIC4.81□□□□□ -1.64
C9orf72Q96LT7 RNU1-20P-201ENST00000363314 162 ntBASIC4.81□□□□□ -1.64
C9orf72Q96LT7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 RPA2P2-201ENST00000419698 796 ntBASIC4.81□□□□□ -1.64
C9orf72Q96LT7 AC093414.1-201ENST00000434712 514 ntBASIC4.81□□□□□ -1.64
C9orf72Q96LT7 ARL4AP3-201ENST00000441452 574 ntBASIC4.81□□□□□ -1.64
C9orf72Q96LT7 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 RNA5SP228-201ENST00000516232 133 ntBASIC4.81□□□□□ -1.64
C9orf72Q96LT7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 SCN1A-220ENST00000641603 12506 ntBASIC4.81□□□□□ -1.64
C9orf72Q96LT7 HSPD1P14-201ENST00000432666 1618 ntBASIC4.81□□□□□ -1.64
C9orf72Q96LT7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 EOGT-210ENST00000615922 1931 ntBASIC4.81□□□□□ -1.64
C9orf72Q96LT7 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 AP001002.1-201ENST00000625148 1513 ntBASIC4.81□□□□□ -1.64
C9orf72Q96LT7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 AC012618.3-205ENST00000637896 1496 ntBASIC4.81□□□□□ -1.64
C9orf72Q96LT7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
C9orf72Q96LT7 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 UGT2B26P-201ENST00000508672 1613 ntBASIC4.8□□□□□ -1.64
C9orf72Q96LT7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 HMGB3P7-201ENST00000400214 611 ntBASIC4.8□□□□□ -1.64
C9orf72Q96LT7 Y_RNA.625-201ENST00000411256 107 ntBASIC4.8□□□□□ -1.64
C9orf72Q96LT7 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.8□□□□□ -1.64
C9orf72Q96LT7 RBMY2TP-201ENST00000451162 947 ntBASIC4.8□□□□□ -1.64
C9orf72Q96LT7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms