Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM5Q96HC4 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM5Q96HC4 ZNF652P1-201ENST00000442420 1309 ntBASIC4.88□□□□□ -1.63
PDLIM5Q96HC4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM5Q96HC4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM5Q96HC4 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDLIM5Q96HC4 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.88□□□□□ -1.63
PDLIM5Q96HC4 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.88□□□□□ -1.63
PDLIM5Q96HC4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AC093311.1-201ENST00000506586 2021 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 CCT8P1-201ENST00000413611 1657 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 RNU6-452P-201ENST00000384406 107 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 SNORA70.10-201ENST00000384515 134 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 OR1F12-201ENST00000402365 945 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 Z97832.1-201ENST00000402490 328 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 MIR1271-201ENST00000408537 86 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 RN7SKP97-201ENST00000410966 333 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 EIF4A1P3-201ENST00000411521 244 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 RPL12P34-201ENST00000424532 479 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AC073052.1-201ENST00000440417 714 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 RNA5SP103-201ENST00000459503 118 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 RN7SL97P-201ENST00000486780 299 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 HMGB3P16-201ENST00000508037 287 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 RNA5SP249-201ENST00000516127 99 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AC026688.1-201ENST00000520639 1168 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 BNIP3P1-201ENST00000547295 580 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 OR11J2P-201ENST00000555298 907 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 MIR1269B-201ENST00000580405 75 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AC005377.1-201ENST00000605126 456 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AL136370.1-201ENST00000608166 691 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AL627230.1-201ENST00000613077 211 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AC037198.3-201ENST00000616754 526 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AL591926.8-201ENST00000616876 211 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 LINC01739-205ENST00000641890 573 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 MAPK10-304ENST00000641341 3984 ntBASIC4.87□□□□□ -1.63
PDLIM5Q96HC4 AL022322.2-201ENST00000624072 20397 ntBASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 AC011155.1-201ENST00000316512 456 ntBASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 AL078599.1-201ENST00000402075 293 ntBASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 SNORA11.3-201ENST00000408471 128 ntBASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 AC013404.1-201ENST00000413068 249 ntBASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 OR2AH1P-201ENST00000425717 928 ntBASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 NPM1P24-201ENST00000428039 894 ntBASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 AL031663.1-201ENST00000437445 219 ntBASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 MTND5P8-201ENST00000449817 1083 ntBASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 BX284632.1-201ENST00000478218 541 ntBASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 AC107398.1-201ENST00000486904 505 ntBASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 HIGD1AP14-201ENST00000507617 282 ntBASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 AC090022.1-201ENST00000546569 311 ntBASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 NOP56P3-201ENST00000549457 385 ntBASIC4.86□□□□□ -1.63
PDLIM5Q96HC4 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms