Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AP002530.1-201ENST00000405705 684 ntBASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 EEF1B2P5-201ENST00000444820 548 ntBASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 AC234781.3-201ENST00000452540 973 ntBASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 RPL23AP37-201ENST00000479658 549 ntBASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 AC013701.1-201ENST00000522657 465 ntBASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 AC020910.3-201ENST00000603701 874 ntBASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 SUMO2P15-201ENST00000604285 278 ntBASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 AC017076.1-201ENST00000607613 578 ntBASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 AC009163.6-201ENST00000612367 342 ntBASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 MIR6862-1-201ENST00000613016 70 ntBASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 EIF3FP1-201ENST00000613970 806 ntBASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 MIR6862-2-201ENST00000614755 70 ntBASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 AC234782.5-201ENST00000617723 324 ntBASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.56□□□□□ -1.68
CLHC1Q8NHS4 AC114546.3-201ENST00000623582 1734 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 AL049555.1-201ENST00000562834 1933 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 RN7SKP95-201ENST00000362860 303 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 RNU1-82P-201ENST00000390851 165 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 U3.30-201ENST00000391308 210 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 AC019050.1-201ENST00000418508 492 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 AC093162.1-201ENST00000419682 124 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 RPL7P57-201ENST00000423238 740 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 FABP7P1-201ENST00000424004 391 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 RPS27P18-201ENST00000431701 247 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 ELOCP10-201ENST00000440624 327 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 MRPL48P1-201ENST00000445390 636 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 RN7SL52P-201ENST00000584271 284 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 RNF138P2-201ENST00000603490 592 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 ELOCP34-201ENST00000604436 327 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 AL353600.1-201ENST00000608148 251 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 AC016252.1-201ENST00000609721 474 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 MIR6826-201ENST00000617808 98 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 AL359757.1-201ENST00000623176 255 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 AP001273.1-201ENST00000624493 3152 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 CYP1D1P-201ENST00000416662 1433 ntBASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.55□□□□□ -1.68
CLHC1Q8NHS4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 AC009229.4-201ENST00000623854 1947 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 MIPEPP2-201ENST00000422560 1819 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 MIR708-201ENST00000390708 88 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 RNU6-603P-201ENST00000411403 107 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 CHEK2P3-201ENST00000416118 248 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 VN1R37P-201ENST00000419096 748 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 LINC00993-201ENST00000420453 540 ntBASIC4.54□□□□□ -1.68
CLHC1Q8NHS4 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms