Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.21□□□□□ -1.42
XRN1Q8IZH2 AP000648.2-201ENST00000624182 404 ntBASIC6.21□□□□□ -1.42
XRN1Q8IZH2 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
XRN1Q8IZH2 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
XRN1Q8IZH2 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
XRN1Q8IZH2 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
XRN1Q8IZH2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
XRN1Q8IZH2 AC027228.2-201ENST00000567141 2154 ntBASIC6.2□□□□□ -1.42
XRN1Q8IZH2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 RNA5SP124-201ENST00000362739 110 ntBASIC6.2□□□□□ -1.42
XRN1Q8IZH2 MIR3065-201ENST00000390137 79 ntBASIC6.2□□□□□ -1.42
XRN1Q8IZH2 ATP5F1P3-201ENST00000397213 657 ntBASIC6.2□□□□□ -1.42
XRN1Q8IZH2 EIF4HP2-201ENST00000424380 563 ntBASIC6.2□□□□□ -1.42
XRN1Q8IZH2 RPS29P7-201ENST00000439662 171 ntBASIC6.2□□□□□ -1.42
XRN1Q8IZH2 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.2□□□□□ -1.42
XRN1Q8IZH2 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 NPM1P41-201ENST00000512920 831 ntBASIC6.2□□□□□ -1.42
XRN1Q8IZH2 CCNG2P1-201ENST00000549521 1000 ntBASIC6.2□□□□□ -1.42
XRN1Q8IZH2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
XRN1Q8IZH2 AP005435.3-201ENST00000531260 3198 ntBASIC6.19□□□□□ -1.42
XRN1Q8IZH2 AC097374.1-203ENST00000400783 485 ntBASIC6.19□□□□□ -1.42
XRN1Q8IZH2 AL590806.1-201ENST00000415818 853 ntBASIC6.19□□□□□ -1.42
XRN1Q8IZH2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 AL157831.1-201ENST00000426134 473 ntBASIC6.19□□□□□ -1.42
XRN1Q8IZH2 AL445584.1-201ENST00000431451 330 ntBASIC6.19□□□□□ -1.42
XRN1Q8IZH2 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 RPL23AP2-201ENST00000471227 466 ntBASIC6.19□□□□□ -1.42
XRN1Q8IZH2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 RNU4-89P-201ENST00000607443 133 ntBASIC6.19□□□□□ -1.42
XRN1Q8IZH2 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 TMEM30CP-203ENST00000637814 1035 ntBASIC6.19□□□□□ -1.42
XRN1Q8IZH2 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 AC106871.1-201ENST00000568324 3102 ntBASIC6.19□□□□□ -1.42
XRN1Q8IZH2 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 PCNPP4-201ENST00000414817 517 ntBASIC6.19□□□□□ -1.42
XRN1Q8IZH2 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 AC104333.2-201ENST00000422630 192 ntBASIC6.19□□□□□ -1.42
XRN1Q8IZH2 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 AP003400.2-201ENST00000624036 666 ntBASIC6.19□□□□□ -1.42
XRN1Q8IZH2 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.19□□□□□ -1.42
XRN1Q8IZH2 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
XRN1Q8IZH2 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
XRN1Q8IZH2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
XRN1Q8IZH2 DDX18P5-201ENST00000534547 1306 ntBASIC6.18□□□□□ -1.42
XRN1Q8IZH2 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
XRN1Q8IZH2 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
XRN1Q8IZH2 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
XRN1Q8IZH2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
XRN1Q8IZH2 RNU6-761P-201ENST00000384148 107 ntBASIC6.18□□□□□ -1.42
XRN1Q8IZH2 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.18□□□□□ -1.42
XRN1Q8IZH2 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.18□□□□□ -1.42
XRN1Q8IZH2 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.18□□□□□ -1.42
XRN1Q8IZH2 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC6.18□□□□□ -1.42
XRN1Q8IZH2 RPL6P5-201ENST00000445678 828 ntBASIC6.18□□□□□ -1.42
XRN1Q8IZH2 AL157385.1-201ENST00000446973 268 ntBASIC6.18□□□□□ -1.42
XRN1Q8IZH2 BTF3P6-201ENST00000448054 499 ntBASIC6.18□□□□□ -1.42
XRN1Q8IZH2 AL133547.1-201ENST00000448546 220 ntBASIC6.18□□□□□ -1.42
XRN1Q8IZH2 RNA5SP49-201ENST00000516450 115 ntBASIC6.18□□□□□ -1.42
XRN1Q8IZH2 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.18□□□□□ -1.42
XRN1Q8IZH2 AC105233.3-201ENST00000531125 744 ntBASIC6.18□□□□□ -1.42
XRN1Q8IZH2 AC127024.5-201ENST00000580085 462 ntBASIC6.18□□□□□ -1.42
XRN1Q8IZH2 AC008833.1-201ENST00000611633 691 ntBASIC6.18□□□□□ -1.42
XRN1Q8IZH2 MIR7151-201ENST00000617477 60 ntBASIC6.18□□□□□ -1.42
XRN1Q8IZH2 AC004777.1-201ENST00000624317 287 ntBASIC6.18□□□□□ -1.42
XRN1Q8IZH2 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
XRN1Q8IZH2 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
XRN1Q8IZH2 AL137141.1-201ENST00000624622 4836 ntBASIC6.18□□□□□ -1.42
XRN1Q8IZH2 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
XRN1Q8IZH2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
XRN1Q8IZH2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms