Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 RHEBP2-201ENST00000450289 600 ntBASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AC079168.2-201ENST00000453977 416 ntBASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 OR11I1P-201ENST00000486033 954 ntBASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 HMGB1P19-201ENST00000517578 577 ntBASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AC008147.3-201ENST00000548666 354 ntBASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 FKBP1BP1-201ENST00000553366 325 ntBASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AL110118.1-201ENST00000553543 400 ntBASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AC087477.6-201ENST00000559595 843 ntBASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AC105129.1-201ENST00000560250 297 ntBASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AC012213.4-201ENST00000606457 354 ntBASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AL592494.3-201ENST00000609485 464 ntBASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AL596275.2-204ENST00000641628 552 ntBASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AL596275.2-206ENST00000641957 626 ntBASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
C9orf40Q8IXQ3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AL356317.1-201ENST00000396110 1436 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AL672167.1-204ENST00000641875 3017 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 CDC27P2-201ENST00000425026 1922 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 RNU6-152P-201ENST00000384037 107 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AL590762.2-201ENST00000395798 571 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AC234781.4-201ENST00000419384 244 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 RSL24D1P8-201ENST00000434442 492 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AC016831.4-201ENST00000438302 307 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 TXNP2-201ENST00000443918 295 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AC006967.1-201ENST00000467608 589 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 RN7SKP34-201ENST00000516142 244 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 RNA5SP464-201ENST00000516251 108 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AP002981.1-201ENST00000517692 975 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 IGKV1-32-201ENST00000519290 311 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 BNIP3P1-201ENST00000547295 580 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 KATNBL1P1-201ENST00000605192 748 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AL161616.1-201ENST00000611867 286 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AC119674.1-220ENST00000641502 1048 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 SAMMSON-213ENST00000641336 1521 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 AP001273.1-201ENST00000624493 3152 ntBASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.39□□□□□ -1.71
C9orf40Q8IXQ3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 MAPK10-286ENST00000641208 8747 ntBASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 AL121950.1-201ENST00000624993 2077 ntBASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 MAPK10-263ENST00000641052 4307 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms