Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC060775.1-201ENST00000518241 520 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 SMARCE1P4-201ENST00000523647 241 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AL133241.1-201ENST00000556832 487 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 MIR4420-201ENST00000583944 77 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC090181.2-201ENST00000602975 672 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC009220.3-201ENST00000604318 586 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC018690.1-201ENST00000608144 626 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC008498.1-201ENST00000613012 531 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC023158.2-201ENST00000614876 543 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AL136981.2-201ENST00000617319 734 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC119674.1-212ENST00000641155 993 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC109315.1-201ENST00000584143 1347 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 SAMMSON-210ENST00000641260 1308 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 MRRFP1-201ENST00000435941 1675 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 GNL2P1-201ENST00000451274 2190 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 U3.28-201ENST00000391249 210 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 CDK8P2-201ENST00000415020 547 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC019050.1-201ENST00000418508 492 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AK4P4-201ENST00000419465 646 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 RPS3P2-201ENST00000421346 701 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 TUBB4BP6-201ENST00000437576 479 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC092641.1-201ENST00000440229 772 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC079922.1-201ENST00000443291 359 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 RPL36AP33-201ENST00000450395 310 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC144530.1-201ENST00000452862 555 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 ZNF114P1-201ENST00000453500 292 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 RPS27AP3-201ENST00000453803 454 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC006499.4-201ENST00000510947 694 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 RNU6-416P-201ENST00000516265 103 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 LINC00556-201ENST00000569603 412 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AP005119.1-201ENST00000580956 292 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC009237.12-201ENST00000604755 742 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC087241.4-201ENST00000612441 480 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 Z99129.1-201ENST00000612510 255 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC096861.1-201ENST00000616652 240 ntBASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
TRIM48Q8IWZ4 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM48Q8IWZ4 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
TRIM48Q8IWZ4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms