Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHFQ7M4L6 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHFQ7M4L6 CCT8P1-201ENST00000413611 1657 ntBASIC4.77□□□□□ -1.65
SHFQ7M4L6 CR788268.1-201ENST00000603931 1809 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHFQ7M4L6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHFQ7M4L6 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHFQ7M4L6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHFQ7M4L6 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHFQ7M4L6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHFQ7M4L6 RNU6-666P-201ENST00000363499 107 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 RNU6-185P-201ENST00000384421 107 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 RNU6-906P-201ENST00000384700 70 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHFQ7M4L6 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 RPL7P27-201ENST00000403775 720 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 HMGB3P18-201ENST00000406327 590 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 VPS26BP1-201ENST00000417155 755 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 XKRYP1-201ENST00000423438 492 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 NAP1L4P2-201ENST00000425958 899 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AL662874.1-201ENST00000426065 230 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 XKRYP2-201ENST00000432915 492 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 USP9YP24-201ENST00000434374 697 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 USP9YP17-201ENST00000444617 696 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 RPL7P45-201ENST00000455851 743 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AP000942.1-201ENST00000463969 747 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC058823.1-201ENST00000485315 474 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 RN7SL814P-201ENST00000487715 300 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 RN7SL649P-201ENST00000496974 275 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 PRELID3BP5-201ENST00000508612 460 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC006499.4-201ENST00000510947 694 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 RN7SKP99-201ENST00000517028 307 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC090888.2-201ENST00000559765 1144 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC005341.1-201ENST00000571086 708 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 SS18L2P2-201ENST00000583960 235 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC079315.1-201ENST00000602952 623 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC011626.1-201ENST00000604710 562 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC005377.1-201ENST00000605126 456 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC024060.1-201ENST00000607052 494 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 AC008115.3-201ENST00000614874 549 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 AL118522.2-201ENST00000616045 615 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHFQ7M4L6 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 MFSD8-220ENST00000641243 1422 ntBASIC4.76□□□□□ -1.65
SHFQ7M4L6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHFQ7M4L6 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHFQ7M4L6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHFQ7M4L6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.76□□□□□ -1.65
SHFQ7M4L6 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHFQ7M4L6 AC133552.1-201ENST00000569988 4007 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 CIR1P2-201ENST00000514821 1342 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHFQ7M4L6 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SHFQ7M4L6 METTL21EP-201ENST00000298105 713 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 RNA5SP46-201ENST00000362370 120 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 RNU6-729P-201ENST00000384399 107 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 AL136131.1-201ENST00000406079 803 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 AC013404.1-201ENST00000413068 249 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 VTA1P1-201ENST00000414044 866 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 GTF2IP5-201ENST00000414608 731 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 HIGD1AP15-201ENST00000416198 280 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 Z93019.1-201ENST00000416450 973 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 AC093155.2-201ENST00000420734 937 ntBASIC4.75□□□□□ -1.65
SHFQ7M4L6 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.75□□□□□ -1.65
SHFQ7M4L6 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms