Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 AC090079.2-201ENST00000575289 768 ntBASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 AC084373.1-201ENST00000603311 235 ntBASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 MIR6839-201ENST00000620425 113 ntBASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 HSPA8P17-201ENST00000427029 1382 ntBASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LYSMD4Q5XG99 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 NCLP2-201ENST00000416078 1462 ntBASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 AC110792.3-201ENST00000595906 1614 ntBASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 IGKV7-3-201ENST00000357453 298 ntBASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 AC002524.1-201ENST00000411687 547 ntBASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 AC114755.2-201ENST00000413520 361 ntBASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 OR2B7P-201ENST00000429302 934 ntBASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 RPL17P35-201ENST00000432217 549 ntBASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 RPL19P16-201ENST00000433839 588 ntBASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 AC016831.4-201ENST00000438302 307 ntBASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 CALM1P2-201ENST00000452941 448 ntBASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 RPL23AP56-201ENST00000460778 453 ntBASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 BTG4P1-201ENST00000510421 183 ntBASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 AC007423.1-201ENST00000605009 627 ntBASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 AC092953.2-201ENST00000608000 699 ntBASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 AC026523.2-201ENST00000625039 7739 ntBASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.88□□□□□ -1.63
LYSMD4Q5XG99 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 Y_RNA.110-201ENST00000363220 99 ntBASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 RN7SKP227-201ENST00000364445 330 ntBASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 RPL26P37-201ENST00000411983 438 ntBASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 AL590806.1-201ENST00000415818 853 ntBASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 RPL17P36-201ENST00000420302 549 ntBASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 RSL24D1P6-201ENST00000426934 401 ntBASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 COX6CP13-201ENST00000428703 226 ntBASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 RPL7AP49-201ENST00000429522 581 ntBASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 ZNF965P-201ENST00000432501 817 ntBASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 AL591438.1-201ENST00000433508 581 ntBASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 AC073143.1-201ENST00000436316 395 ntBASIC4.87□□□□□ -1.63
LYSMD4Q5XG99 AL353898.1-201ENST00000444055 238 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms