Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 RNU6-249P-201ENST00000363016 102 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 RNU6-707P-201ENST00000364647 95 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 MIR105-2-201ENST00000385083 81 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 OR6E1P-201ENST00000414424 923 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AC234782.4-201ENST00000417646 1048 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AL354766.1-201ENST00000423396 542 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 MTND5P25-201ENST00000430499 799 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 SETP8-201ENST00000435341 628 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 EXTL2P1-201ENST00000446218 416 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AC243772.1-201ENST00000451620 410 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 FRG2FP-204ENST00000453982 852 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 ACA64.4-201ENST00000459070 127 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 RN7SL72P-201ENST00000460697 269 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AL133445.1-201ENST00000467051 452 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 RN7SL799P-201ENST00000475891 298 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AC090114.3-201ENST00000479267 829 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 RN7SL184P-201ENST00000488308 297 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 TCP11X3P-202ENST00000514289 1254 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AC097486.1-201ENST00000515331 210 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 RNA5SP34-201ENST00000516887 130 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AC092709.1-201ENST00000521355 1045 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AP001284.1-201ENST00000528393 2118 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AC092747.2-201ENST00000545069 983 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AP005901.5-201ENST00000545779 1796 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 IGBP1P1-201ENST00000554337 1009 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AC009094.1-201ENST00000564443 426 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 TXNP4-201ENST00000575018 310 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 DPRXP5-201ENST00000604662 539 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AC130304.1-201ENST00000622942 2385 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 AC092162.3-201ENST00000624511 1624 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 MIR1322-201ENST00000638013 71 ntBASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC144BQ3MJ40 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 TTC39DP-201ENST00000416781 1688 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC093719.1-202ENST00000392735 373 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 RNU2-6P-201ENST00000411404 190 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AL008987.1-201ENST00000415528 237 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 DPRXP1-201ENST00000426312 460 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AL022331.1-201ENST00000429025 477 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 USP9YP22-201ENST00000438971 294 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 HMGB1P16-201ENST00000447155 540 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 NPM1P39-201ENST00000449818 867 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 AC011979.1-201ENST00000472300 483 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 VPS26AP1-201ENST00000483197 979 ntBASIC6.62□□□□□ -1.35
CCDC144BQ3MJ40 RPL23AP40-201ENST00000487630 390 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms