Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 RNA5SP440-201ENST00000612665 119 ntBASIC4.04□□□□□ -1.76
USF2Q15853 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.04□□□□□ -1.76
USF2Q15853 AC123768.4-201ENST00000616244 701 ntBASIC4.04□□□□□ -1.76
USF2Q15853 RMST_9.1-201ENST00000619945 193 ntBASIC4.04□□□□□ -1.76
USF2Q15853 MTCO1P14-201ENST00000441695 1559 ntBASIC4.04□□□□□ -1.76
USF2Q15853 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.04□□□□□ -1.76
USF2Q15853 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
USF2Q15853 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
USF2Q15853 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
USF2Q15853 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.04□□□□□ -1.76
USF2Q15853 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.03□□□□□ -1.76
USF2Q15853 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USF2Q15853 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.03□□□□□ -1.76
USF2Q15853 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.03□□□□□ -1.76
USF2Q15853 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.03□□□□□ -1.76
USF2Q15853 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USF2Q15853 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USF2Q15853 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USF2Q15853 RN7SKP104-201ENST00000362605 328 ntBASIC4.03□□□□□ -1.76
USF2Q15853 AL139039.2-201ENST00000407436 479 ntBASIC4.03□□□□□ -1.76
USF2Q15853 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.03□□□□□ -1.76
USF2Q15853 RN7SKP206-201ENST00000410823 293 ntBASIC4.03□□□□□ -1.76
USF2Q15853 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.03□□□□□ -1.76
USF2Q15853 RPL7P57-201ENST00000423238 740 ntBASIC4.03□□□□□ -1.76
USF2Q15853 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.03□□□□□ -1.76
USF2Q15853 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.03□□□□□ -1.76
USF2Q15853 AL161722.2-201ENST00000434731 981 ntBASIC4.03□□□□□ -1.76
USF2Q15853 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.03□□□□□ -1.76
USF2Q15853 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.03□□□□□ -1.76
USF2Q15853 AL161636.2-201ENST00000445179 927 ntBASIC4.03□□□□□ -1.76
USF2Q15853 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USF2Q15853 MRPL35P2-201ENST00000448009 511 ntBASIC4.03□□□□□ -1.76
USF2Q15853 BUD31P2-201ENST00000449374 300 ntBASIC4.03□□□□□ -1.76
USF2Q15853 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.03□□□□□ -1.76
USF2Q15853 BX842559.2-201ENST00000451418 605 ntBASIC4.03□□□□□ -1.76
USF2Q15853 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.03□□□□□ -1.76
USF2Q15853 AL445433.1-201ENST00000457507 257 ntBASIC4.03□□□□□ -1.76
USF2Q15853 RNU7-27P-201ENST00000459281 62 ntBASIC4.03□□□□□ -1.76
USF2Q15853 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.03□□□□□ -1.76
USF2Q15853 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.03□□□□□ -1.76
USF2Q15853 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.03□□□□□ -1.76
USF2Q15853 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.03□□□□□ -1.76
USF2Q15853 AC106872.4-201ENST00000510050 523 ntBASIC4.03□□□□□ -1.76
USF2Q15853 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.03□□□□□ -1.76
USF2Q15853 BUD31P1-201ENST00000521828 359 ntBASIC4.03□□□□□ -1.76
USF2Q15853 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.03□□□□□ -1.76
USF2Q15853 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.03□□□□□ -1.76
USF2Q15853 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.03□□□□□ -1.76
USF2Q15853 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.03□□□□□ -1.76
USF2Q15853 GSTP1P1-201ENST00000548078 319 ntBASIC4.03□□□□□ -1.76
USF2Q15853 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.03□□□□□ -1.76
USF2Q15853 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.03□□□□□ -1.76
USF2Q15853 AL161713.1-201ENST00000555538 145 ntBASIC4.03□□□□□ -1.76
USF2Q15853 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.03□□□□□ -1.76
USF2Q15853 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.03□□□□□ -1.76
USF2Q15853 RPL10P14-201ENST00000565265 298 ntBASIC4.03□□□□□ -1.76
USF2Q15853 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.03□□□□□ -1.76
USF2Q15853 RN7SL753P-201ENST00000581238 290 ntBASIC4.03□□□□□ -1.76
USF2Q15853 FAM60CP-201ENST00000591086 664 ntBASIC4.03□□□□□ -1.76
USF2Q15853 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.03□□□□□ -1.76
USF2Q15853 AC005255.1-201ENST00000593748 216 ntBASIC4.03□□□□□ -1.76
USF2Q15853 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
USF2Q15853 AC104695.2-201ENST00000605056 775 ntBASIC4.03□□□□□ -1.76
USF2Q15853 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.03□□□□□ -1.76
USF2Q15853 AC126175.1-201ENST00000617041 758 ntBASIC4.03□□□□□ -1.76
USF2Q15853 AC139769.3-201ENST00000618383 175 ntBASIC4.03□□□□□ -1.76
USF2Q15853 MIR8080-201ENST00000622224 89 ntBASIC4.03□□□□□ -1.76
USF2Q15853 AL691477.1-201ENST00000624398 162 ntBASIC4.03□□□□□ -1.76
USF2Q15853 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.03□□□□□ -1.76
USF2Q15853 AC119674.1-212ENST00000641155 993 ntBASIC4.03□□□□□ -1.76
USF2Q15853 OR2L1P-202ENST00000641567 1023 ntBASIC4.03□□□□□ -1.76
USF2Q15853 AC053481.2-202ENST00000582394 1500 ntBASIC4.03□□□□□ -1.76
USF2Q15853 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.03□□□□□ -1.76
USF2Q15853 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USF2Q15853 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
USF2Q15853 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
USF2Q15853 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.03□□□□□ -1.76
USF2Q15853 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
USF2Q15853 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
USF2Q15853 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USF2Q15853 AC108751.5-201ENST00000492880 1336 ntBASIC4.02□□□□□ -1.77
USF2Q15853 DDX18P5-201ENST00000534547 1306 ntBASIC4.02□□□□□ -1.77
USF2Q15853 IRF5P1-201ENST00000504852 2164 ntBASIC4.02□□□□□ -1.77
USF2Q15853 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
USF2Q15853 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
USF2Q15853 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.02□□□□□ -1.77
USF2Q15853 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USF2Q15853 AC103591.2-201ENST00000265259 766 ntBASIC4.02□□□□□ -1.77
USF2Q15853 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.02□□□□□ -1.77
USF2Q15853 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.02□□□□□ -1.77
USF2Q15853 RNU1-77P-201ENST00000390868 162 ntBASIC4.02□□□□□ -1.77
USF2Q15853 RNA5SP339-201ENST00000390987 122 ntBASIC4.02□□□□□ -1.77
USF2Q15853 AL391422.1-201ENST00000402155 436 ntBASIC4.02□□□□□ -1.77
USF2Q15853 HDGFP1-201ENST00000405943 252 ntBASIC4.02□□□□□ -1.77
USF2Q15853 RN7SKP16-201ENST00000410180 299 ntBASIC4.02□□□□□ -1.77
USF2Q15853 GJA6P-201ENST00000415117 1042 ntBASIC4.02□□□□□ -1.77
USF2Q15853 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.02□□□□□ -1.77
USF2Q15853 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.02□□□□□ -1.77
USF2Q15853 AC013429.2-201ENST00000418798 781 ntBASIC4.02□□□□□ -1.77
USF2Q15853 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms