Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
GABPAQ06546 CCT8P1-201ENST00000413611 1657 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
GABPAQ06546 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
GABPAQ06546 AP000473.2-201ENST00000602659 1537 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 AC008079.2-201ENST00000623543 20396 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
GABPAQ06546 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.43□□□□□ -1.54
GABPAQ06546 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
GABPAQ06546 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
GABPAQ06546 AL445487.1-201ENST00000415694 1580 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
GABPAQ06546 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.43□□□□□ -1.54
GABPAQ06546 CASC19-206ENST00000641028 1430 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
GABPAQ06546 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.43□□□□□ -1.54
GABPAQ06546 AC017079.1-201ENST00000333650 415 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 RPL32P3-201ENST00000359025 275 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 SNORA71.2-201ENST00000364941 134 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
GABPAQ06546 SDHCP2-201ENST00000398565 501 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.43□□□□□ -1.54
GABPAQ06546 OR5M12P-201ENST00000423388 929 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 NDUFA5P1-201ENST00000433858 341 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.43□□□□□ -1.54
GABPAQ06546 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.43□□□□□ -1.54
GABPAQ06546 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.43□□□□□ -1.54
GABPAQ06546 ISCUP1-201ENST00000454451 448 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.43□□□□□ -1.54
GABPAQ06546 RN7SL385P-201ENST00000468873 276 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.43□□□□□ -1.54
GABPAQ06546 AC147055.1-201ENST00000509261 750 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.43□□□□□ -1.54
GABPAQ06546 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.43□□□□□ -1.54
GABPAQ06546 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.43□□□□□ -1.54
GABPAQ06546 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
GABPAQ06546 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.43□□□□□ -1.54
GABPAQ06546 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.43□□□□□ -1.54
GABPAQ06546 AC009303.3-201ENST00000591103 736 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 AC138473.1-201ENST00000605717 526 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 AC015914.2-201ENST00000618167 288 ntBASIC5.43□□□□□ -1.54
GABPAQ06546 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.43□□□□□ -1.54
GABPAQ06546 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
GABPAQ06546 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
GABPAQ06546 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.42□□□□□ -1.54
GABPAQ06546 AP001284.1-201ENST00000528393 2118 ntBASIC5.42□□□□□ -1.54
GABPAQ06546 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.42□□□□□ -1.54
GABPAQ06546 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
GABPAQ06546 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
GABPAQ06546 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.42□□□□□ -1.54
GABPAQ06546 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
GABPAQ06546 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GABPAQ06546 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
GABPAQ06546 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
GABPAQ06546 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
GABPAQ06546 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
GABPAQ06546 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.42□□□□□ -1.54
GABPAQ06546 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GABPAQ06546 Z98745.1-201ENST00000402553 494 ntBASIC5.42□□□□□ -1.54
GABPAQ06546 RFESDP1-201ENST00000422350 461 ntBASIC5.42□□□□□ -1.54
GABPAQ06546 AC104651.2-201ENST00000447549 528 ntBASIC5.42□□□□□ -1.54
GABPAQ06546 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GABPAQ06546 Z95152.1-201ENST00000453556 656 ntBASIC5.42□□□□□ -1.54
GABPAQ06546 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.42□□□□□ -1.54
GABPAQ06546 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.42□□□□□ -1.54
GABPAQ06546 RNA5SP249-201ENST00000516127 99 ntBASIC5.42□□□□□ -1.54
GABPAQ06546 AP002981.1-201ENST00000517692 975 ntBASIC5.42□□□□□ -1.54
GABPAQ06546 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.42□□□□□ -1.54
GABPAQ06546 AC138832.1-201ENST00000522871 556 ntBASIC5.42□□□□□ -1.54
GABPAQ06546 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
GABPAQ06546 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.42□□□□□ -1.54
GABPAQ06546 AC136624.4-201ENST00000573044 370 ntBASIC5.42□□□□□ -1.54
GABPAQ06546 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.42□□□□□ -1.54
GABPAQ06546 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.42□□□□□ -1.54
GABPAQ06546 AC002069.2-201ENST00000603580 883 ntBASIC5.42□□□□□ -1.54
GABPAQ06546 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GABPAQ06546 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.42□□□□□ -1.54
GABPAQ06546 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.42□□□□□ -1.54
GABPAQ06546 THAP12P8-201ENST00000447914 2115 ntBASIC5.42□□□□□ -1.54
GABPAQ06546 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
GABPAQ06546 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
GABPAQ06546 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
GABPAQ06546 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.42□□□□□ -1.54
GABPAQ06546 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
GABPAQ06546 AC007342.9-201ENST00000623877 1385 ntBASIC5.42□□□□□ -1.54
GABPAQ06546 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GABPAQ06546 ICE2P1-201ENST00000512800 1849 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.41□□□□□ -1.54
GABPAQ06546 VN2R3P-201ENST00000422626 1412 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GABPAQ06546 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GABPAQ06546 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
GABPAQ06546 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
GABPAQ06546 IGKV7-3-201ENST00000357453 298 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
GABPAQ06546 PEX12P1-201ENST00000400284 1048 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 GAPDHP49-201ENST00000421421 961 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 AL356387.2-201ENST00000422272 243 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 AP001324.1-201ENST00000428553 399 ntBASIC5.41□□□□□ -1.54
GABPAQ06546 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms