Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PKNOX1P55347 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.58□□□□□ -1.68
PKNOX1P55347 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.58□□□□□ -1.68
PKNOX1P55347 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PKNOX1P55347 RNU1-94P-201ENST00000362627 173 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 RN7SKP95-201ENST00000362860 303 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 CHEK2P3-201ENST00000416118 248 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.58□□□□□ -1.68
PKNOX1P55347 AL355433.1-201ENST00000422804 300 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 Z74021.1-201ENST00000423610 407 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PKNOX1P55347 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PKNOX1P55347 HMGB3P9-201ENST00000441799 583 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.58□□□□□ -1.68
PKNOX1P55347 AC073850.1-201ENST00000449243 255 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 HSPE1P22-201ENST00000456856 327 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 RPL23AP65-201ENST00000475608 468 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 AC147055.1-201ENST00000509261 750 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.58□□□□□ -1.68
PKNOX1P55347 RNA5SP92-201ENST00000516437 110 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 RNA5SP360-201ENST00000516555 118 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.58□□□□□ -1.68
PKNOX1P55347 AC022882.1-201ENST00000532142 501 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 CYCSP28-201ENST00000534284 321 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.58□□□□□ -1.68
PKNOX1P55347 MIR3691-201ENST00000578066 90 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.58□□□□□ -1.68
PKNOX1P55347 MIR4489-201ENST00000578869 62 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 AC209154.1-201ENST00000582156 337 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 HMGB2P1-201ENST00000591146 634 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.58□□□□□ -1.68
PKNOX1P55347 AC133552.5-201ENST00000604266 540 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.58□□□□□ -1.68
PKNOX1P55347 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.58□□□□□ -1.68
PKNOX1P55347 AC112694.2-201ENST00000623697 768 ntBASIC4.58□□□□□ -1.68
PKNOX1P55347 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.58□□□□□ -1.68
PKNOX1P55347 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.58□□□□□ -1.68
PKNOX1P55347 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PKNOX1P55347 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PKNOX1P55347 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PKNOX1P55347 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.58□□□□□ -1.68
PKNOX1P55347 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PKNOX1P55347 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PKNOX1P55347 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.57□□□□□ -1.68
PKNOX1P55347 HSPD1P14-201ENST00000432666 1618 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 CASC19-204ENST00000641001 2055 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PKNOX1P55347 RNA5SP305-201ENST00000362665 119 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 RNU4-4P-201ENST00000364588 130 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PKNOX1P55347 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PKNOX1P55347 MIR765-201ENST00000390226 114 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PKNOX1P55347 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PKNOX1P55347 RPL21P108-201ENST00000413857 481 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 AC093162.1-201ENST00000419682 124 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 AC013470.3-201ENST00000420252 1194 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.57□□□□□ -1.68
PKNOX1P55347 AC112498.1-201ENST00000444401 332 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.57□□□□□ -1.68
PKNOX1P55347 AURKAPS2-201ENST00000454983 333 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 EIF2S2P5-201ENST00000457635 968 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 AC005532.2-201ENST00000467154 373 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.57□□□□□ -1.68
PKNOX1P55347 AC006499.3-201ENST00000506077 748 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.57□□□□□ -1.68
PKNOX1P55347 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.57□□□□□ -1.68
PKNOX1P55347 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.57□□□□□ -1.68
PKNOX1P55347 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.57□□□□□ -1.68
PKNOX1P55347 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PKNOX1P55347 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.57□□□□□ -1.68
PKNOX1P55347 FAM60CP-201ENST00000591086 664 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.57□□□□□ -1.68
PKNOX1P55347 FAM27B-201ENST00000610601 213 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.57□□□□□ -1.68
PKNOX1P55347 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.57□□□□□ -1.68
PKNOX1P55347 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.57□□□□□ -1.68
PKNOX1P55347 AC091905.4-201ENST00000623432 202 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 AP002799.1-201ENST00000623552 423 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 AC079298.2-201ENST00000623885 459 ntBASIC4.57□□□□□ -1.68
PKNOX1P55347 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PKNOX1P55347 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.57□□□□□ -1.68
PKNOX1P55347 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.57□□□□□ -1.68
PKNOX1P55347 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.57□□□□□ -1.68
PKNOX1P55347 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PKNOX1P55347 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.56□□□□□ -1.68
PKNOX1P55347 OR51H2P-202ENST00000641424 3046 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PKNOX1P55347 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PKNOX1P55347 LINC01109-201ENST00000603837 3081 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PKNOX1P55347 RN7SKP115-201ENST00000363177 317 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PKNOX1P55347 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PKNOX1P55347 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PKNOX1P55347 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.56□□□□□ -1.68
PKNOX1P55347 CYCSP10-201ENST00000417973 294 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 OR51A6P-201ENST00000418680 1004 ntBASIC4.56□□□□□ -1.68
PKNOX1P55347 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms