Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXG1P55316 AC114774.1-201ENST00000507410 1770 ntBASIC4.8□□□□□ -1.64
FOXG1P55316 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXG1P55316 LINC01963-201ENST00000562038 3148 ntBASIC4.8□□□□□ -1.64
FOXG1P55316 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXG1P55316 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXG1P55316 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXG1P55316 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXG1P55316 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
FOXG1P55316 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
FOXG1P55316 AC015799.1-201ENST00000622996 3122 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXG1P55316 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXG1P55316 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXG1P55316 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
FOXG1P55316 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXG1P55316 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
FOXG1P55316 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXG1P55316 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXG1P55316 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXG1P55316 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXG1P55316 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXG1P55316 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXG1P55316 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
FOXG1P55316 AL353625.1-202ENST00000366273 571 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXG1P55316 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
FOXG1P55316 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXG1P55316 MTND4LP20-201ENST00000402379 270 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXG1P55316 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXG1P55316 AC004022.2-201ENST00000413824 193 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.79□□□□□ -1.64
FOXG1P55316 MTCO3P41-201ENST00000414801 328 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXG1P55316 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.79□□□□□ -1.64
FOXG1P55316 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXG1P55316 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXG1P55316 MTCYBP5-201ENST00000423752 1135 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 RIMKLBP2-201ENST00000424737 654 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 PRUNEP1-201ENST00000425846 705 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXG1P55316 RPL7L1P9-201ENST00000431298 745 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 GSTM5P1-201ENST00000434751 660 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXG1P55316 AL353572.1-201ENST00000442490 417 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 LINC02210-201ENST00000444561 288 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 MTCYBP3-201ENST00000445588 1137 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 AC105399.1-202ENST00000447303 205 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 RPL12P26-201ENST00000452430 487 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXG1P55316 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXG1P55316 CBX1P5-201ENST00000475330 559 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 MTND2P14-201ENST00000482139 351 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXG1P55316 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXG1P55316 AC105420.1-201ENST00000504389 582 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 FABP5P6-201ENST00000510588 409 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 MTND6P2-201ENST00000512226 524 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXG1P55316 AC008549.1-201ENST00000512900 643 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXG1P55316 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXG1P55316 MTCYBP41-201ENST00000528913 1123 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 AC005000.1-201ENST00000536192 288 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXG1P55316 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXG1P55316 NOP56P3-201ENST00000549457 385 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 AC126177.5-201ENST00000549599 178 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXG1P55316 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXG1P55316 AC027281.1-201ENST00000574178 758 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXG1P55316 AC010487.1-201ENST00000594408 1172 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXG1P55316 AC002069.2-201ENST00000603580 883 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXG1P55316 AC007349.4-201ENST00000608114 532 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 Z95327.3-201ENST00000610385 572 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 TUSC7.1-201ENST00000610969 165 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 AC015540.1-201ENST00000615828 501 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 AP003072.4-201ENST00000624580 310 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 AP003400.5-201ENST00000624827 617 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXG1P55316 AC073869.8-201ENST00000641806 335 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 AC079776.5-201ENST00000641920 211 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXG1P55316 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
FOXG1P55316 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXG1P55316 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXG1P55316 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXG1P55316 Z83820.1-201ENST00000456978 1499 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
FOXG1P55316 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXG1P55316 AC027514.1-201ENST00000588561 1603 ntBASIC4.79□□□□□ -1.64
FOXG1P55316 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXG1P55316 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXG1P55316 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms