Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 BRD9P1-201ENST00000529855 560 ntBASIC4.87□□□□□ -1.63
CDH6P55285 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH6P55285 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.87□□□□□ -1.63
CDH6P55285 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CDH6P55285 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.87□□□□□ -1.63
CDH6P55285 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH6P55285 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH6P55285 AC005520.3-201ENST00000602874 370 ntBASIC4.87□□□□□ -1.63
CDH6P55285 AL512782.1-201ENST00000603093 364 ntBASIC4.87□□□□□ -1.63
CDH6P55285 AC097505.1-201ENST00000610199 565 ntBASIC4.87□□□□□ -1.63
CDH6P55285 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CDH6P55285 AL445528.2-201ENST00000620582 470 ntBASIC4.87□□□□□ -1.63
CDH6P55285 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH6P55285 AL031119.1-201ENST00000404707 1879 ntBASIC4.87□□□□□ -1.63
CDH6P55285 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH6P55285 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.87□□□□□ -1.63
CDH6P55285 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH6P55285 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CDH6P55285 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH6P55285 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH6P55285 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH6P55285 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CDH6P55285 MIR550A3-201ENST00000390735 95 ntBASIC4.86□□□□□ -1.63
CDH6P55285 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH6P55285 RN7SKP100-201ENST00000411258 284 ntBASIC4.86□□□□□ -1.63
CDH6P55285 AC007394.1-201ENST00000421941 531 ntBASIC4.86□□□□□ -1.63
CDH6P55285 CYCSP11-201ENST00000436426 315 ntBASIC4.86□□□□□ -1.63
CDH6P55285 PA2G4P6-201ENST00000438325 1197 ntBASIC4.86□□□□□ -1.63
CDH6P55285 RPS3AP53-201ENST00000454716 778 ntBASIC4.86□□□□□ -1.63
CDH6P55285 AC091685.2-201ENST00000454924 864 ntBASIC4.86□□□□□ -1.63
CDH6P55285 RN7SL610P-201ENST00000463845 291 ntBASIC4.86□□□□□ -1.63
CDH6P55285 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH6P55285 RPS4XP18-201ENST00000495480 763 ntBASIC4.86□□□□□ -1.63
CDH6P55285 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH6P55285 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH6P55285 RN7SKP276-201ENST00000516242 268 ntBASIC4.86□□□□□ -1.63
CDH6P55285 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH6P55285 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH6P55285 OR5D15P-201ENST00000531671 942 ntBASIC4.86□□□□□ -1.63
CDH6P55285 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH6P55285 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH6P55285 AC015912.2-201ENST00000571053 181 ntBASIC4.86□□□□□ -1.63
CDH6P55285 MIR4737-201ENST00000583979 81 ntBASIC4.86□□□□□ -1.63
CDH6P55285 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH6P55285 AL391358.1-201ENST00000605342 190 ntBASIC4.86□□□□□ -1.63
CDH6P55285 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.86□□□□□ -1.63
CDH6P55285 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.86□□□□□ -1.63
CDH6P55285 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.86□□□□□ -1.63
CDH6P55285 AC123912.3-201ENST00000600907 1367 ntBASIC4.86□□□□□ -1.63
CDH6P55285 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH6P55285 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CDH6P55285 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.86□□□□□ -1.63
CDH6P55285 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDH6P55285 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH6P55285 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CDH6P55285 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH6P55285 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH6P55285 OR56B2P-201ENST00000317102 954 ntBASIC4.85□□□□□ -1.63
CDH6P55285 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH6P55285 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CDH6P55285 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH6P55285 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH6P55285 FABP7P1-201ENST00000424004 391 ntBASIC4.85□□□□□ -1.63
CDH6P55285 AC104837.2-201ENST00000427236 424 ntBASIC4.85□□□□□ -1.63
CDH6P55285 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH6P55285 AC097523.2-201ENST00000435551 652 ntBASIC4.85□□□□□ -1.63
CDH6P55285 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH6P55285 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH6P55285 H2AFZP5-201ENST00000446960 382 ntBASIC4.85□□□□□ -1.63
CDH6P55285 AL645937.3-201ENST00000453647 936 ntBASIC4.85□□□□□ -1.63
CDH6P55285 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH6P55285 NIP7P2-201ENST00000485801 544 ntBASIC4.85□□□□□ -1.63
CDH6P55285 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH6P55285 RNU2-30P-201ENST00000516209 141 ntBASIC4.85□□□□□ -1.63
CDH6P55285 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH6P55285 RN7SL652P-201ENST00000577769 300 ntBASIC4.85□□□□□ -1.63
CDH6P55285 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CDH6P55285 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH6P55285 AL355852.1-201ENST00000454081 1771 ntBASIC4.85□□□□□ -1.63
CDH6P55285 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH6P55285 MAPK10-303ENST00000641324 3959 ntBASIC4.85□□□□□ -1.63
CDH6P55285 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CDH6P55285 AC132825.1-201ENST00000463573 2247 ntBASIC4.84□□□□□ -1.63
CDH6P55285 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH6P55285 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH6P55285 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH6P55285 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH6P55285 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH6P55285 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH6P55285 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
CDH6P55285 SNORA58B-201ENST00000364259 136 ntBASIC4.84□□□□□ -1.63
CDH6P55285 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH6P55285 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH6P55285 BX510359.2-201ENST00000417920 305 ntBASIC4.84□□□□□ -1.63
CDH6P55285 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH6P55285 OR51A6P-201ENST00000418680 1004 ntBASIC4.84□□□□□ -1.63
CDH6P55285 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH6P55285 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH6P55285 Z80107.2-201ENST00000445127 392 ntBASIC4.84□□□□□ -1.63
CDH6P55285 RPS6P2-201ENST00000454208 705 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms