Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSNK1EP49674 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSNK1EP49674 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.78□□□□□ -1.64
CSNK1EP49674 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CSNK1EP49674 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CSNK1EP49674 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.65
CSNK1EP49674 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.78□□□□□ -1.65
CSNK1EP49674 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1EP49674 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1EP49674 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1EP49674 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CSNK1EP49674 AL137100.1-201ENST00000556703 1620 ntBASIC4.77□□□□□ -1.65
CSNK1EP49674 SNORD113.2-201ENST00000364166 89 ntBASIC4.77□□□□□ -1.65
CSNK1EP49674 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1EP49674 OR5M12P-201ENST00000423388 929 ntBASIC4.77□□□□□ -1.65
CSNK1EP49674 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.77□□□□□ -1.65
CSNK1EP49674 AC022431.1-201ENST00000450941 438 ntBASIC4.77□□□□□ -1.65
CSNK1EP49674 RPL10P17-201ENST00000453852 316 ntBASIC4.77□□□□□ -1.65
CSNK1EP49674 AL049874.2-201ENST00000492636 288 ntBASIC4.77□□□□□ -1.65
CSNK1EP49674 AC104971.1-201ENST00000495117 578 ntBASIC4.77□□□□□ -1.65
CSNK1EP49674 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.77□□□□□ -1.65
CSNK1EP49674 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CSNK1EP49674 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1EP49674 SULT1C2P2-201ENST00000562517 294 ntBASIC4.77□□□□□ -1.65
CSNK1EP49674 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.77□□□□□ -1.65
CSNK1EP49674 AL121873.1-201ENST00000616013 524 ntBASIC4.77□□□□□ -1.65
CSNK1EP49674 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.77□□□□□ -1.65
CSNK1EP49674 MIR6830-201ENST00000636015 70 ntBASIC4.77□□□□□ -1.65
CSNK1EP49674 TMEM30CP-203ENST00000637814 1035 ntBASIC4.77□□□□□ -1.65
CSNK1EP49674 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CSNK1EP49674 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1EP49674 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.77□□□□□ -1.65
CSNK1EP49674 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1EP49674 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1EP49674 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CSNK1EP49674 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1EP49674 AC073136.1-201ENST00000449426 2884 ntBASIC4.77□□□□□ -1.65
CSNK1EP49674 HSPA8P17-201ENST00000427029 1382 ntBASIC4.77□□□□□ -1.65
CSNK1EP49674 BTBD10P1-201ENST00000549824 1352 ntBASIC4.77□□□□□ -1.65
CSNK1EP49674 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.77□□□□□ -1.65
CSNK1EP49674 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1EP49674 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CSNK1EP49674 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CSNK1EP49674 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1EP49674 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CSNK1EP49674 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CSNK1EP49674 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.76□□□□□ -1.65
CSNK1EP49674 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.76□□□□□ -1.65
CSNK1EP49674 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1EP49674 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1EP49674 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
CSNK1EP49674 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1EP49674 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1EP49674 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1EP49674 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1EP49674 RNU4-39P-201ENST00000362455 127 ntBASIC4.76□□□□□ -1.65
CSNK1EP49674 AC007618.1-201ENST00000366455 732 ntBASIC4.76□□□□□ -1.65
CSNK1EP49674 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1EP49674 RNA5SP345-201ENST00000410646 108 ntBASIC4.76□□□□□ -1.65
CSNK1EP49674 AC013470.3-201ENST00000420252 1194 ntBASIC4.76□□□□□ -1.65
CSNK1EP49674 CHIAP3-201ENST00000423668 1133 ntBASIC4.76□□□□□ -1.65
CSNK1EP49674 RSL24D1P6-201ENST00000426934 401 ntBASIC4.76□□□□□ -1.65
CSNK1EP49674 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.76□□□□□ -1.65
CSNK1EP49674 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.76□□□□□ -1.65
CSNK1EP49674 OR52E3P-201ENST00000452083 936 ntBASIC4.76□□□□□ -1.65
CSNK1EP49674 NPM1P29-201ENST00000483112 803 ntBASIC4.76□□□□□ -1.65
CSNK1EP49674 RFPL4AP5-201ENST00000514977 504 ntBASIC4.76□□□□□ -1.65
CSNK1EP49674 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.76□□□□□ -1.65
CSNK1EP49674 BUD31P1-201ENST00000521828 359 ntBASIC4.76□□□□□ -1.65
CSNK1EP49674 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CSNK1EP49674 AC093591.2-201ENST00000565254 3843 ntBASIC4.76□□□□□ -1.65
CSNK1EP49674 RPL12P25-202ENST00000598100 674 ntBASIC4.76□□□□□ -1.65
CSNK1EP49674 AC096553.1-201ENST00000605169 829 ntBASIC4.76□□□□□ -1.65
CSNK1EP49674 AC023813.4-201ENST00000607580 580 ntBASIC4.76□□□□□ -1.65
CSNK1EP49674 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1EP49674 FRG1EP-201ENST00000634469 770 ntBASIC4.76□□□□□ -1.65
CSNK1EP49674 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CSNK1EP49674 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1EP49674 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1EP49674 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1EP49674 AP001642.1-201ENST00000624727 2117 ntBASIC4.76□□□□□ -1.65
CSNK1EP49674 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1EP49674 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1EP49674 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CSNK1EP49674 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.76□□□□□ -1.65
CSNK1EP49674 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CSNK1EP49674 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.75□□□□□ -1.65
CSNK1EP49674 AC108751.5-201ENST00000492880 1336 ntBASIC4.75□□□□□ -1.65
CSNK1EP49674 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CSNK1EP49674 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
CSNK1EP49674 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1EP49674 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1EP49674 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.75□□□□□ -1.65
CSNK1EP49674 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1EP49674 AC008758.3-201ENST00000507003 1829 ntBASIC4.75□□□□□ -1.65
CSNK1EP49674 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
CSNK1EP49674 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1EP49674 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1EP49674 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1EP49674 SNORA73.1-201ENST00000363107 205 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms