Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL163193.1-201ENST00000444895 788 ntBASIC5.19□□□□□ -1.58
SSR1P43307 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.19□□□□□ -1.58
SSR1P43307 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.19□□□□□ -1.58
SSR1P43307 COX6B1P5-201ENST00000509843 249 ntBASIC5.19□□□□□ -1.58
SSR1P43307 AC021146.3-201ENST00000511911 260 ntBASIC5.19□□□□□ -1.58
SSR1P43307 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.19□□□□□ -1.58
SSR1P43307 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.19□□□□□ -1.58
SSR1P43307 AL352979.3-201ENST00000553515 247 ntBASIC5.19□□□□□ -1.58
SSR1P43307 CYCSP40-201ENST00000575927 294 ntBASIC5.19□□□□□ -1.58
SSR1P43307 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
SSR1P43307 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.19□□□□□ -1.58
SSR1P43307 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.19□□□□□ -1.58
SSR1P43307 VN1R81P-201ENST00000602085 372 ntBASIC5.19□□□□□ -1.58
SSR1P43307 AC123786.2-201ENST00000603459 275 ntBASIC5.19□□□□□ -1.58
SSR1P43307 AC015914.2-201ENST00000618167 288 ntBASIC5.19□□□□□ -1.58
SSR1P43307 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.19□□□□□ -1.58
SSR1P43307 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSR1P43307 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SSR1P43307 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.18□□□□□ -1.58
SSR1P43307 MTCO1P11-201ENST00000429111 1528 ntBASIC5.18□□□□□ -1.58
SSR1P43307 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
SSR1P43307 AC009643.2-201ENST00000603543 1448 ntBASIC5.18□□□□□ -1.58
SSR1P43307 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSR1P43307 SNURFL-201ENST00000309296 343 ntBASIC5.18□□□□□ -1.58
SSR1P43307 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SSR1P43307 RNU6-171P-201ENST00000384354 107 ntBASIC5.18□□□□□ -1.58
SSR1P43307 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SSR1P43307 ATP5HP3-201ENST00000396994 486 ntBASIC5.18□□□□□ -1.58
SSR1P43307 U3.36-201ENST00000408418 213 ntBASIC5.18□□□□□ -1.58
SSR1P43307 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.18□□□□□ -1.58
SSR1P43307 DDX39BP1-205ENST00000422507 192 ntBASIC5.18□□□□□ -1.58
SSR1P43307 RPL12P34-201ENST00000424532 479 ntBASIC5.18□□□□□ -1.58
SSR1P43307 OR7E125P-201ENST00000443450 846 ntBASIC5.18□□□□□ -1.58
SSR1P43307 AL137845.2-201ENST00000444292 988 ntBASIC5.18□□□□□ -1.58
SSR1P43307 EEF1A1P1-201ENST00000447052 739 ntBASIC5.18□□□□□ -1.58
SSR1P43307 BTF3P6-201ENST00000448054 499 ntBASIC5.18□□□□□ -1.58
SSR1P43307 NDUFA5P8-201ENST00000449019 346 ntBASIC5.18□□□□□ -1.58
SSR1P43307 AL645939.1-201ENST00000453429 797 ntBASIC5.18□□□□□ -1.58
SSR1P43307 AL354710.1-201ENST00000453641 246 ntBASIC5.18□□□□□ -1.58
SSR1P43307 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.18□□□□□ -1.58
SSR1P43307 SNRPCP2-201ENST00000504370 475 ntBASIC5.18□□□□□ -1.58
SSR1P43307 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSR1P43307 RPL23AP53-201ENST00000521854 457 ntBASIC5.18□□□□□ -1.58
SSR1P43307 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.18□□□□□ -1.58
SSR1P43307 AC092490.3-201ENST00000545370 572 ntBASIC5.18□□□□□ -1.58
SSR1P43307 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.18□□□□□ -1.58
SSR1P43307 AL049830.4-201ENST00000555149 351 ntBASIC5.18□□□□□ -1.58
SSR1P43307 AC005377.1-201ENST00000605126 456 ntBASIC5.18□□□□□ -1.58
SSR1P43307 AC022467.1-201ENST00000614738 749 ntBASIC5.18□□□□□ -1.58
SSR1P43307 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.18□□□□□ -1.58
SSR1P43307 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.18□□□□□ -1.58
SSR1P43307 AC012414.7-202ENST00000622705 1090 ntBASIC5.18□□□□□ -1.58
SSR1P43307 AC087821.1-201ENST00000623639 567 ntBASIC5.18□□□□□ -1.58
SSR1P43307 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.18□□□□□ -1.58
SSR1P43307 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.18□□□□□ -1.58
SSR1P43307 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.18□□□□□ -1.58
SSR1P43307 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSR1P43307 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSR1P43307 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SSR1P43307 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SSR1P43307 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.18□□□□□ -1.58
SSR1P43307 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.18□□□□□ -1.58
SSR1P43307 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSR1P43307 KARSP3-201ENST00000571212 1504 ntBASIC5.18□□□□□ -1.58
SSR1P43307 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SSR1P43307 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSR1P43307 AC092435.4-201ENST00000623012 4159 ntBASIC5.17□□□□□ -1.58
SSR1P43307 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
SSR1P43307 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.17□□□□□ -1.58
SSR1P43307 AC103591.2-201ENST00000265259 766 ntBASIC5.17□□□□□ -1.58
SSR1P43307 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SSR1P43307 AL136116.2-201ENST00000404020 785 ntBASIC5.17□□□□□ -1.58
SSR1P43307 AL136131.1-201ENST00000406079 803 ntBASIC5.17□□□□□ -1.58
SSR1P43307 BMS1P13-201ENST00000417301 885 ntBASIC5.17□□□□□ -1.58
SSR1P43307 AF186996.5-201ENST00000418098 904 ntBASIC5.17□□□□□ -1.58
SSR1P43307 AL355433.1-201ENST00000422804 300 ntBASIC5.17□□□□□ -1.58
SSR1P43307 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.17□□□□□ -1.58
SSR1P43307 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSR1P43307 AC022022.1-201ENST00000430304 178 ntBASIC5.17□□□□□ -1.58
SSR1P43307 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.17□□□□□ -1.58
SSR1P43307 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.17□□□□□ -1.58
SSR1P43307 COPS8P2-201ENST00000473228 627 ntBASIC5.17□□□□□ -1.58
SSR1P43307 RN7SL222P-201ENST00000476452 299 ntBASIC5.17□□□□□ -1.58
SSR1P43307 RN7SL319P-201ENST00000480656 221 ntBASIC5.17□□□□□ -1.58
SSR1P43307 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.17□□□□□ -1.58
SSR1P43307 AP001960.1-201ENST00000506494 658 ntBASIC5.17□□□□□ -1.58
SSR1P43307 RNA5SP92-201ENST00000516437 110 ntBASIC5.17□□□□□ -1.58
SSR1P43307 RNA5SP43-201ENST00000516559 110 ntBASIC5.17□□□□□ -1.58
SSR1P43307 RN7SKP66-201ENST00000516681 231 ntBASIC5.17□□□□□ -1.58
SSR1P43307 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSR1P43307 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSR1P43307 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SSR1P43307 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.17□□□□□ -1.58
SSR1P43307 AC007424.1-203ENST00000554613 687 ntBASIC5.17□□□□□ -1.58
SSR1P43307 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.17□□□□□ -1.58
SSR1P43307 MIR3691-201ENST00000578066 90 ntBASIC5.17□□□□□ -1.58
SSR1P43307 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.17□□□□□ -1.58
SSR1P43307 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.17□□□□□ -1.58
SSR1P43307 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.17□□□□□ -1.58
SSR1P43307 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms