Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.39□□□□□ -1.23
RXRBP28702 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RXRBP28702 RPL23AP23-201ENST00000452590 471 ntBASIC7.39□□□□□ -1.23
RXRBP28702 AC008280.2-201ENST00000455473 307 ntBASIC7.39□□□□□ -1.23
RXRBP28702 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC7.39□□□□□ -1.23
RXRBP28702 AC009127.1-201ENST00000467090 155 ntBASIC7.39□□□□□ -1.23
RXRBP28702 AC022034.3-201ENST00000471393 478 ntBASIC7.39□□□□□ -1.23
RXRBP28702 AC022447.1-201ENST00000515358 464 ntBASIC7.39□□□□□ -1.23
RXRBP28702 BUD31P1-201ENST00000521828 359 ntBASIC7.39□□□□□ -1.23
RXRBP28702 AC124293.1-201ENST00000530034 493 ntBASIC7.39□□□□□ -1.23
RXRBP28702 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC7.39□□□□□ -1.23
RXRBP28702 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC7.39□□□□□ -1.23
RXRBP28702 DPPA3P2-201ENST00000553589 478 ntBASIC7.39□□□□□ -1.23
RXRBP28702 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RXRBP28702 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC7.39□□□□□ -1.23
RXRBP28702 MIR3915-201ENST00000578518 97 ntBASIC7.39□□□□□ -1.23
RXRBP28702 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.39□□□□□ -1.23
RXRBP28702 MIR4737-201ENST00000583979 81 ntBASIC7.39□□□□□ -1.23
RXRBP28702 AC090616.2-202ENST00000584248 222 ntBASIC7.39□□□□□ -1.23
RXRBP28702 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.39□□□□□ -1.23
RXRBP28702 AC021749.1-201ENST00000604322 607 ntBASIC7.39□□□□□ -1.23
RXRBP28702 AL162431.4-201ENST00000604674 411 ntBASIC7.39□□□□□ -1.23
RXRBP28702 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC7.39□□□□□ -1.23
RXRBP28702 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
RXRBP28702 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RXRBP28702 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RXRBP28702 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
RXRBP28702 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.39□□□□□ -1.23
RXRBP28702 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RXRBP28702 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RXRBP28702 OR55B1P-203ENST00000641518 2602 ntBASIC7.39□□□□□ -1.23
RXRBP28702 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RXRBP28702 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RXRBP28702 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RXRBP28702 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RXRBP28702 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RXRBP28702 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RXRBP28702 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.39□□□□□ -1.23
RXRBP28702 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RXRBP28702 AC105749.1-201ENST00000631338 2008 ntBASIC7.39□□□□□ -1.23
RXRBP28702 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RXRBP28702 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
RXRBP28702 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.38□□□□□ -1.23
RXRBP28702 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
RXRBP28702 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.38□□□□□ -1.23
RXRBP28702 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
RXRBP28702 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.38□□□□□ -1.23
RXRBP28702 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.38□□□□□ -1.23
RXRBP28702 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RXRBP28702 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RXRBP28702 FAM133CP-201ENST00000332869 704 ntBASIC7.38□□□□□ -1.23
RXRBP28702 RNU5B-1-201ENST00000363286 116 ntBASIC7.38□□□□□ -1.23
RXRBP28702 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
RXRBP28702 AL133388.1-201ENST00000404509 287 ntBASIC7.38□□□□□ -1.23
RXRBP28702 SNORA11F-201ENST00000408237 128 ntBASIC7.38□□□□□ -1.23
RXRBP28702 MTND1P21-201ENST00000412991 285 ntBASIC7.38□□□□□ -1.23
RXRBP28702 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC7.38□□□□□ -1.23
RXRBP28702 MGAT2P2-201ENST00000427194 797 ntBASIC7.38□□□□□ -1.23
RXRBP28702 MTCO1P52-201ENST00000433928 531 ntBASIC7.38□□□□□ -1.23
RXRBP28702 AL590399.4-201ENST00000436561 601 ntBASIC7.38□□□□□ -1.23
RXRBP28702 NUTF2P7-201ENST00000453086 375 ntBASIC7.38□□□□□ -1.23
RXRBP28702 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC7.38□□□□□ -1.23
RXRBP28702 ACA64.4-201ENST00000459070 127 ntBASIC7.38□□□□□ -1.23
RXRBP28702 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.38□□□□□ -1.23
RXRBP28702 RPL21P47-201ENST00000483696 477 ntBASIC7.38□□□□□ -1.23
RXRBP28702 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC7.38□□□□□ -1.23
RXRBP28702 SEC11B-201ENST00000518383 499 ntBASIC7.38□□□□□ -1.23
RXRBP28702 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.38□□□□□ -1.23
RXRBP28702 OR5AM1P-201ENST00000532136 1032 ntBASIC7.38□□□□□ -1.23
RXRBP28702 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC7.38□□□□□ -1.23
RXRBP28702 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC7.38□□□□□ -1.23
RXRBP28702 AC087897.1-201ENST00000550134 156 ntBASIC7.38□□□□□ -1.23
RXRBP28702 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC7.38□□□□□ -1.23
RXRBP28702 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.38□□□□□ -1.23
RXRBP28702 MIR548S-201ENST00000581352 82 ntBASIC7.38□□□□□ -1.23
RXRBP28702 AC012417.1-201ENST00000582307 1039 ntBASIC7.38□□□□□ -1.23
RXRBP28702 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC7.38□□□□□ -1.23
RXRBP28702 AC103792.1-201ENST00000603591 919 ntBASIC7.38□□□□□ -1.23
RXRBP28702 AP001521.2-201ENST00000608772 546 ntBASIC7.38□□□□□ -1.23
RXRBP28702 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.38□□□□□ -1.23
RXRBP28702 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.38□□□□□ -1.23
RXRBP28702 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RXRBP28702 AC110597.1-201ENST00000562669 3176 ntBASIC7.38□□□□□ -1.23
RXRBP28702 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RXRBP28702 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.38□□□□□ -1.23
RXRBP28702 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms