Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AC008280.2-201ENST00000455473 307 ntBASIC6.06□□□□□ -1.44
SMARCA1P28370 METTL15P1-201ENST00000481421 1045 ntBASIC6.06□□□□□ -1.44
SMARCA1P28370 AC107398.1-201ENST00000486904 505 ntBASIC6.06□□□□□ -1.44
SMARCA1P28370 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.06□□□□□ -1.44
SMARCA1P28370 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.06□□□□□ -1.44
SMARCA1P28370 AC008638.1-201ENST00000506035 866 ntBASIC6.06□□□□□ -1.44
SMARCA1P28370 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.06□□□□□ -1.44
SMARCA1P28370 IGLV2-28-201ENST00000520681 304 ntBASIC6.06□□□□□ -1.44
SMARCA1P28370 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.06□□□□□ -1.44
SMARCA1P28370 AL358913.1-201ENST00000554342 121 ntBASIC6.06□□□□□ -1.44
SMARCA1P28370 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.06□□□□□ -1.44
SMARCA1P28370 RN7SL708P-201ENST00000580952 299 ntBASIC6.06□□□□□ -1.44
SMARCA1P28370 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.06□□□□□ -1.44
SMARCA1P28370 RN7SL622P-201ENST00000585292 275 ntBASIC6.06□□□□□ -1.44
SMARCA1P28370 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.06□□□□□ -1.44
SMARCA1P28370 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.06□□□□□ -1.44
SMARCA1P28370 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.06□□□□□ -1.44
SMARCA1P28370 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.06□□□□□ -1.44
SMARCA1P28370 AC025811.1-201ENST00000604312 472 ntBASIC6.06□□□□□ -1.44
SMARCA1P28370 AL365400.2-201ENST00000605604 902 ntBASIC6.06□□□□□ -1.44
SMARCA1P28370 AL356274.1-201ENST00000617064 410 ntBASIC6.06□□□□□ -1.44
SMARCA1P28370 AC006386.1-201ENST00000619436 415 ntBASIC6.06□□□□□ -1.44
SMARCA1P28370 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
SMARCA1P28370 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.06□□□□□ -1.44
SMARCA1P28370 AC019226.2-201ENST00000625973 424 ntBASIC6.06□□□□□ -1.44
SMARCA1P28370 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SMARCA1P28370 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMARCA1P28370 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.06□□□□□ -1.44
SMARCA1P28370 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SMARCA1P28370 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SMARCA1P28370 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.06□□□□□ -1.44
SMARCA1P28370 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.06□□□□□ -1.44
SMARCA1P28370 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMARCA1P28370 ABCC13-202ENST00000463099 3842 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 VPS35P1-201ENST00000563400 1518 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SMARCA1P28370 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SMARCA1P28370 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SMARCA1P28370 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.05□□□□□ -1.44
SMARCA1P28370 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SMARCA1P28370 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
SMARCA1P28370 HSPA8P14-201ENST00000552265 1805 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMARCA1P28370 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.05□□□□□ -1.44
SMARCA1P28370 AL603865.2-201ENST00000401679 213 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 U3.36-201ENST00000408418 213 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 RNU4-34P-201ENST00000410431 124 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 MTND2P16-201ENST00000419987 799 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 OSTCP5-201ENST00000425293 453 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 AC005189.1-201ENST00000431286 310 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 RPS29P10-201ENST00000439197 166 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 AC000041.1-201ENST00000439655 175 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.05□□□□□ -1.44
SMARCA1P28370 EEF1B2P5-201ENST00000444820 548 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 MTATP6P26-201ENST00000445926 662 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.05□□□□□ -1.44
SMARCA1P28370 BX842559.2-201ENST00000451418 605 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 HSPE1P22-201ENST00000456856 327 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 MTCO3P35-201ENST00000485582 781 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 RPS27AP16-201ENST00000492222 470 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.05□□□□□ -1.44
SMARCA1P28370 AC010627.1-201ENST00000503819 1294 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 BOLA3P3-201ENST00000505182 232 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.05□□□□□ -1.44
SMARCA1P28370 AC016559.2-201ENST00000510759 359 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.05□□□□□ -1.44
SMARCA1P28370 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SMARCA1P28370 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SMARCA1P28370 AP003717.3-201ENST00000544832 1180 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMARCA1P28370 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.05□□□□□ -1.44
SMARCA1P28370 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.05□□□□□ -1.44
SMARCA1P28370 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.05□□□□□ -1.44
SMARCA1P28370 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.05□□□□□ -1.44
SMARCA1P28370 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.05□□□□□ -1.44
SMARCA1P28370 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SMARCA1P28370 AC006363.1-201ENST00000603806 463 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 ELOCP35-201ENST00000604289 336 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 AL139407.1-201ENST00000613826 1175 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 AC118658.2-201ENST00000618697 459 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 AC022079.2-201ENST00000619739 566 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 AC099494.2-201ENST00000623371 978 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 CU459211.1-201ENST00000635667 749 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 SAMMSON-227ENST00000642114 1199 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.05□□□□□ -1.44
SMARCA1P28370 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SMARCA1P28370 MFSD8-220ENST00000641243 1422 ntBASIC6.05□□□□□ -1.44
SMARCA1P28370 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.05□□□□□ -1.44
SMARCA1P28370 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SMARCA1P28370 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SMARCA1P28370 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.05□□□□□ -1.44
SMARCA1P28370 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
SMARCA1P28370 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SMARCA1P28370 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SMARCA1P28370 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SMARCA1P28370 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
SMARCA1P28370 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.04□□□□□ -1.44
SMARCA1P28370 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SMARCA1P28370 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SMARCA1P28370 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms