Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 GNG5P2-201ENST00000372054 207 ntBASIC5.86□□□□□ -1.47
POLR2AP24928 Z97832.1-201ENST00000402490 328 ntBASIC5.86□□□□□ -1.47
POLR2AP24928 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.86□□□□□ -1.47
POLR2AP24928 AC010099.3-201ENST00000423896 409 ntBASIC5.86□□□□□ -1.47
POLR2AP24928 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.86□□□□□ -1.47
POLR2AP24928 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
POLR2AP24928 AC016831.4-201ENST00000438302 307 ntBASIC5.86□□□□□ -1.47
POLR2AP24928 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.86□□□□□ -1.47
POLR2AP24928 AC091167.1-201ENST00000492017 396 ntBASIC5.86□□□□□ -1.47
POLR2AP24928 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.86□□□□□ -1.47
POLR2AP24928 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.86□□□□□ -1.47
POLR2AP24928 RNU2-30P-201ENST00000516209 141 ntBASIC5.86□□□□□ -1.47
POLR2AP24928 Y_RNA.688-201ENST00000516565 95 ntBASIC5.86□□□□□ -1.47
POLR2AP24928 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.86□□□□□ -1.47
POLR2AP24928 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.86□□□□□ -1.47
POLR2AP24928 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.86□□□□□ -1.47
POLR2AP24928 AL109766.1-201ENST00000555080 552 ntBASIC5.86□□□□□ -1.47
POLR2AP24928 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.86□□□□□ -1.47
POLR2AP24928 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC5.86□□□□□ -1.47
POLR2AP24928 AL133338.2-201ENST00000604292 736 ntBASIC5.86□□□□□ -1.47
POLR2AP24928 AC092954.1-201ENST00000609121 445 ntBASIC5.86□□□□□ -1.47
POLR2AP24928 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.86□□□□□ -1.47
POLR2AP24928 AL022401.1-201ENST00000619498 108 ntBASIC5.86□□□□□ -1.47
POLR2AP24928 MIR6853-201ENST00000619642 74 ntBASIC5.86□□□□□ -1.47
POLR2AP24928 AP006248.3-201ENST00000623580 594 ntBASIC5.86□□□□□ -1.47
POLR2AP24928 SAMM50P1-201ENST00000455403 1399 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
POLR2AP24928 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
POLR2AP24928 AC104118.1-201ENST00000607625 1589 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 ASNSP1-204ENST00000641977 1664 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 Z95114.1-201ENST00000624264 14574 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
POLR2AP24928 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
POLR2AP24928 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.85□□□□□ -1.47
POLR2AP24928 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
POLR2AP24928 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
POLR2AP24928 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
POLR2AP24928 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
POLR2AP24928 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
POLR2AP24928 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.85□□□□□ -1.47
POLR2AP24928 AL158827.1-201ENST00000416300 391 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.85□□□□□ -1.47
POLR2AP24928 RPS27AP12-201ENST00000429552 465 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 AL513321.1-201ENST00000441175 761 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 CR769776.1-201ENST00000441254 787 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 KATNBL1P3-201ENST00000443475 909 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 BX842559.2-201ENST00000451418 605 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.85□□□□□ -1.47
POLR2AP24928 PSAT1P4-201ENST00000466500 526 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 AC020779.1-201ENST00000478757 796 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 RPL23AP73-201ENST00000492507 471 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 MTND4LP2-201ENST00000502312 285 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 NAMPTP2-201ENST00000505629 1115 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
POLR2AP24928 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.85□□□□□ -1.47
POLR2AP24928 CKS1BP1-201ENST00000555221 240 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 AC068831.4-201ENST00000556118 109 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.85□□□□□ -1.47
POLR2AP24928 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.85□□□□□ -1.47
POLR2AP24928 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.85□□□□□ -1.47
POLR2AP24928 GAS5-AS1-201ENST00000602767 694 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 RNU4-5P-201ENST00000607255 135 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.85□□□□□ -1.47
POLR2AP24928 AC008759.3-201ENST00000613300 508 ntBASIC5.85□□□□□ -1.47
POLR2AP24928 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.85□□□□□ -1.47
POLR2AP24928 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.85□□□□□ -1.47
POLR2AP24928 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
POLR2AP24928 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
POLR2AP24928 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
POLR2AP24928 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
POLR2AP24928 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
POLR2AP24928 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
POLR2AP24928 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
POLR2AP24928 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
POLR2AP24928 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
POLR2AP24928 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.84□□□□□ -1.47
POLR2AP24928 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
POLR2AP24928 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
POLR2AP24928 AC017079.1-201ENST00000333650 415 ntBASIC5.84□□□□□ -1.47
POLR2AP24928 IGKV7-3-201ENST00000357453 298 ntBASIC5.84□□□□□ -1.47
POLR2AP24928 SNORD51.1-201ENST00000365405 77 ntBASIC5.84□□□□□ -1.47
POLR2AP24928 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
POLR2AP24928 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.84□□□□□ -1.47
POLR2AP24928 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.84□□□□□ -1.47
POLR2AP24928 AL591719.1-201ENST00000444669 744 ntBASIC5.84□□□□□ -1.47
POLR2AP24928 SEPT10P1-201ENST00000517342 1162 ntBASIC5.84□□□□□ -1.47
POLR2AP24928 BNIP3P5-201ENST00000562290 498 ntBASIC5.84□□□□□ -1.47
POLR2AP24928 AC007224.1-201ENST00000564410 144 ntBASIC5.84□□□□□ -1.47
POLR2AP24928 AGGF1P6-201ENST00000569213 976 ntBASIC5.84□□□□□ -1.47
POLR2AP24928 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.84□□□□□ -1.47
POLR2AP24928 MIR5699-201ENST00000578903 90 ntBASIC5.84□□□□□ -1.47
POLR2AP24928 AC015726.1-201ENST00000602353 681 ntBASIC5.84□□□□□ -1.47
POLR2AP24928 AC011939.3-201ENST00000613686 466 ntBASIC5.84□□□□□ -1.47
POLR2AP24928 AL590410.1-201ENST00000617925 333 ntBASIC5.84□□□□□ -1.47
POLR2AP24928 MIR3974-201ENST00000637126 96 ntBASIC5.84□□□□□ -1.47
POLR2AP24928 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.84□□□□□ -1.47
POLR2AP24928 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.84□□□□□ -1.47
POLR2AP24928 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.48
POLR2AP24928 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms