Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.57□□□□□ -1.52
BDNFP23560 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.57□□□□□ -1.52
BDNFP23560 TAS2R6P-201ENST00000605022 826 ntBASIC5.57□□□□□ -1.52
BDNFP23560 AC010857.1-201ENST00000606398 594 ntBASIC5.57□□□□□ -1.52
BDNFP23560 AC107308.1-201ENST00000615897 301 ntBASIC5.57□□□□□ -1.52
BDNFP23560 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.57□□□□□ -1.52
BDNFP23560 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.57□□□□□ -1.52
BDNFP23560 AC016717.3-201ENST00000624730 554 ntBASIC5.57□□□□□ -1.52
BDNFP23560 AP000843.1-201ENST00000624880 701 ntBASIC5.57□□□□□ -1.52
BDNFP23560 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BDNFP23560 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BDNFP23560 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BDNFP23560 TCP1P3-201ENST00000414406 1498 ntBASIC5.57□□□□□ -1.52
BDNFP23560 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BDNFP23560 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.57□□□□□ -1.52
BDNFP23560 AL121839.2-201ENST00000565058 6943 ntBASIC5.57□□□□□ -1.52
BDNFP23560 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BDNFP23560 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BDNFP23560 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BDNFP23560 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.57□□□□□ -1.52
BDNFP23560 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BDNFP23560 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
BDNFP23560 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.56□□□□□ -1.52
BDNFP23560 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.56□□□□□ -1.52
BDNFP23560 U3.3-201ENST00000362986 216 ntBASIC5.56□□□□□ -1.52
BDNFP23560 SNORA74A-201ENST00000364089 198 ntBASIC5.56□□□□□ -1.52
BDNFP23560 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BDNFP23560 U3.36-201ENST00000408418 213 ntBASIC5.56□□□□□ -1.52
BDNFP23560 RN7SKP213-201ENST00000410746 298 ntBASIC5.56□□□□□ -1.52
BDNFP23560 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.56□□□□□ -1.52
BDNFP23560 AC023347.2-201ENST00000433994 462 ntBASIC5.56□□□□□ -1.52
BDNFP23560 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.56□□□□□ -1.52
BDNFP23560 ELOCP11-201ENST00000436690 332 ntBASIC5.56□□□□□ -1.52
BDNFP23560 ELOCP16-201ENST00000444494 332 ntBASIC5.56□□□□□ -1.52
BDNFP23560 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.56□□□□□ -1.52
BDNFP23560 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.56□□□□□ -1.52
BDNFP23560 MTND2P30-201ENST00000456663 382 ntBASIC5.56□□□□□ -1.52
BDNFP23560 AC079168.1-201ENST00000458741 345 ntBASIC5.56□□□□□ -1.52
BDNFP23560 AC089999.1-201ENST00000460336 374 ntBASIC5.56□□□□□ -1.52
BDNFP23560 RPL30P11-201ENST00000495304 339 ntBASIC5.56□□□□□ -1.52
BDNFP23560 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.56□□□□□ -1.52
BDNFP23560 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.56□□□□□ -1.52
BDNFP23560 AC010468.3-201ENST00000508225 458 ntBASIC5.56□□□□□ -1.52
BDNFP23560 COL6A4P2-205ENST00000509855 506 ntBASIC5.56□□□□□ -1.52
BDNFP23560 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BDNFP23560 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.56□□□□□ -1.52
BDNFP23560 AC012400.1-201ENST00000518452 381 ntBASIC5.56□□□□□ -1.52
BDNFP23560 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.56□□□□□ -1.52
BDNFP23560 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.56□□□□□ -1.52
BDNFP23560 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.56□□□□□ -1.52
BDNFP23560 AC006116.3-201ENST00000592968 361 ntBASIC5.56□□□□□ -1.52
BDNFP23560 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.56□□□□□ -1.52
BDNFP23560 BX323046.1-201ENST00000610145 535 ntBASIC5.56□□□□□ -1.52
BDNFP23560 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.56□□□□□ -1.52
BDNFP23560 MIR7155-201ENST00000615925 56 ntBASIC5.56□□□□□ -1.52
BDNFP23560 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.56□□□□□ -1.52
BDNFP23560 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.56□□□□□ -1.52
BDNFP23560 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BDNFP23560 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BDNFP23560 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BDNFP23560 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.56□□□□□ -1.52
BDNFP23560 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
BDNFP23560 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
BDNFP23560 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
BDNFP23560 AC091046.3-201ENST00000631455 1574 ntBASIC5.55□□□□□ -1.52
BDNFP23560 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
BDNFP23560 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
BDNFP23560 AC025125.1-201ENST00000624743 1922 ntBASIC5.55□□□□□ -1.52
BDNFP23560 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BDNFP23560 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
BDNFP23560 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
BDNFP23560 RNU6-252P-201ENST00000363232 107 ntBASIC5.55□□□□□ -1.52
BDNFP23560 RNU6-984P-201ENST00000363236 109 ntBASIC5.55□□□□□ -1.52
BDNFP23560 HSPD1P16-201ENST00000402302 394 ntBASIC5.55□□□□□ -1.52
BDNFP23560 SNORA11B-201ENST00000408175 129 ntBASIC5.55□□□□□ -1.52
BDNFP23560 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
BDNFP23560 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
BDNFP23560 EI24P4-201ENST00000423683 1078 ntBASIC5.55□□□□□ -1.52
BDNFP23560 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
BDNFP23560 CEACAMP1-201ENST00000434624 1035 ntBASIC5.55□□□□□ -1.52
BDNFP23560 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.55□□□□□ -1.52
BDNFP23560 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.55□□□□□ -1.52
BDNFP23560 MED28P3-201ENST00000444288 531 ntBASIC5.55□□□□□ -1.52
BDNFP23560 AC023271.1-201ENST00000445936 1090 ntBASIC5.55□□□□□ -1.52
BDNFP23560 AL353718.1-201ENST00000451028 517 ntBASIC5.55□□□□□ -1.52
BDNFP23560 TRBV8-2-201ENST00000475637 270 ntBASIC5.55□□□□□ -1.52
BDNFP23560 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.55□□□□□ -1.52
BDNFP23560 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.55□□□□□ -1.52
BDNFP23560 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
BDNFP23560 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.55□□□□□ -1.52
BDNFP23560 OR8K2P-201ENST00000524645 927 ntBASIC5.55□□□□□ -1.52
BDNFP23560 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.55□□□□□ -1.52
BDNFP23560 OSBPL9P3-201ENST00000534523 595 ntBASIC5.55□□□□□ -1.52
BDNFP23560 OR5AN2P-201ENST00000534535 896 ntBASIC5.55□□□□□ -1.52
BDNFP23560 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
BDNFP23560 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.55□□□□□ -1.52
BDNFP23560 AC114947.2-201ENST00000565748 2125 ntBASIC5.55□□□□□ -1.52
BDNFP23560 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.55□□□□□ -1.52
BDNFP23560 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.55□□□□□ -1.52
BDNFP23560 AC090312.2-201ENST00000582687 378 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms