Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL5A1P20908 AC008549.2-201ENST00000333482 706 ntBASIC4.44□□□□□ -1.7
COL5A1P20908 RNU1-94P-201ENST00000362627 173 ntBASIC4.44□□□□□ -1.7
COL5A1P20908 RNU1-130P-201ENST00000363930 160 ntBASIC4.44□□□□□ -1.7
COL5A1P20908 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL5A1P20908 RNA5SP317-201ENST00000410176 116 ntBASIC4.44□□□□□ -1.7
COL5A1P20908 RNA5SP311-201ENST00000411290 116 ntBASIC4.44□□□□□ -1.7
COL5A1P20908 AC008280.1-201ENST00000418851 412 ntBASIC4.44□□□□□ -1.7
COL5A1P20908 NFYAP1-201ENST00000431953 972 ntBASIC4.44□□□□□ -1.7
COL5A1P20908 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.44□□□□□ -1.7
COL5A1P20908 RNA5SP315-201ENST00000516340 116 ntBASIC4.44□□□□□ -1.7
COL5A1P20908 SNORA31.9-201ENST00000516429 84 ntBASIC4.44□□□□□ -1.7
COL5A1P20908 RNA5SP312-201ENST00000517068 116 ntBASIC4.44□□□□□ -1.7
COL5A1P20908 ARF4P1-201ENST00000605447 541 ntBASIC4.44□□□□□ -1.7
COL5A1P20908 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL5A1P20908 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL5A1P20908 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC4.43□□□□□ -1.7
COL5A1P20908 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL5A1P20908 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
COL5A1P20908 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL5A1P20908 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.43□□□□□ -1.7
COL5A1P20908 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL5A1P20908 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL5A1P20908 AL121657.1-201ENST00000327215 531 ntBASIC4.43□□□□□ -1.7
COL5A1P20908 ATP5F1P3-201ENST00000397213 657 ntBASIC4.43□□□□□ -1.7
COL5A1P20908 AL358178.1-201ENST00000407698 397 ntBASIC4.43□□□□□ -1.7
COL5A1P20908 AL356095.1-201ENST00000417217 199 ntBASIC4.43□□□□□ -1.7
COL5A1P20908 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.43□□□□□ -1.7
COL5A1P20908 RPS12P10-201ENST00000427031 377 ntBASIC4.43□□□□□ -1.7
COL5A1P20908 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.43□□□□□ -1.7
COL5A1P20908 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.43□□□□□ -1.7
COL5A1P20908 HSFY6P-201ENST00000445573 403 ntBASIC4.43□□□□□ -1.7
COL5A1P20908 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.43□□□□□ -1.7
COL5A1P20908 RN7SL303P-201ENST00000469773 251 ntBASIC4.43□□□□□ -1.7
COL5A1P20908 AC069304.1-201ENST00000491593 704 ntBASIC4.43□□□□□ -1.7
COL5A1P20908 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.43□□□□□ -1.7
COL5A1P20908 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.43□□□□□ -1.7
COL5A1P20908 MIR4286-201ENST00000580651 93 ntBASIC4.43□□□□□ -1.7
COL5A1P20908 AC011477.5-201ENST00000586571 259 ntBASIC4.43□□□□□ -1.7
COL5A1P20908 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.43□□□□□ -1.7
COL5A1P20908 AC091979.2-201ENST00000607514 214 ntBASIC4.43□□□□□ -1.7
COL5A1P20908 RNA5SP196-201ENST00000625967 102 ntBASIC4.43□□□□□ -1.7
COL5A1P20908 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL5A1P20908 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL5A1P20908 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
COL5A1P20908 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL5A1P20908 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC4.43□□□□□ -1.7
COL5A1P20908 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL5A1P20908 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL5A1P20908 VN2R3P-201ENST00000422626 1412 ntBASIC4.43□□□□□ -1.7
COL5A1P20908 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.42□□□□□ -1.7
COL5A1P20908 AC090220.1-201ENST00000593078 1699 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL5A1P20908 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL5A1P20908 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL5A1P20908 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
COL5A1P20908 AC008033.1-201ENST00000216407 1162 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 CYCSP19-201ENST00000411715 316 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL5A1P20908 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.42□□□□□ -1.7
COL5A1P20908 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.42□□□□□ -1.7
COL5A1P20908 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.42□□□□□ -1.7
COL5A1P20908 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.42□□□□□ -1.7
COL5A1P20908 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL5A1P20908 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.42□□□□□ -1.7
COL5A1P20908 AC243756.2-201ENST00000618406 463 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.42□□□□□ -1.7
COL5A1P20908 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL5A1P20908 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL5A1P20908 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL5A1P20908 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL5A1P20908 ICE2P1-201ENST00000512800 1849 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 AL445487.1-201ENST00000415694 1580 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 AC108467.2-201ENST00000617640 1597 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL5A1P20908 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL5A1P20908 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL5A1P20908 AL590762.2-201ENST00000395798 571 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL5A1P20908 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.42□□□□□ -1.7
COL5A1P20908 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.42□□□□□ -1.7
COL5A1P20908 AC053481.1-201ENST00000467217 306 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 UQCRHP4-201ENST00000471686 272 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 DEFB109A-201ENST00000482450 265 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 AC105137.1-201ENST00000484355 562 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL5A1P20908 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.42□□□□□ -1.7
COL5A1P20908 DSTNP2-201ENST00000504533 515 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.42□□□□□ -1.7
COL5A1P20908 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.42□□□□□ -1.7
COL5A1P20908 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL5A1P20908 AC023632.4-201ENST00000517783 191 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL5A1P20908 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.42□□□□□ -1.7
COL5A1P20908 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.42□□□□□ -1.7
COL5A1P20908 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.42□□□□□ -1.7
COL5A1P20908 AC073137.1-201ENST00000605636 634 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 AC023043.4-201ENST00000612081 449 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 AC140479.6-201ENST00000633535 357 ntBASIC4.42□□□□□ -1.7
COL5A1P20908 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms