Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 U8.14-201ENST00000390843 143 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AL589647.1-201ENST00000402485 466 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NFKB1P19838 AL450992.3-201ENST00000413192 568 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.76□□□□□ -1.33
NFKB1P19838 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.76□□□□□ -1.33
NFKB1P19838 BX295541.1-201ENST00000417774 250 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AHCYP8-201ENST00000425108 209 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 OR4F13P-201ENST00000428478 931 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.76□□□□□ -1.33
NFKB1P19838 SDCBPP1-201ENST00000440192 890 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 MTND6P13-201ENST00000443510 523 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AC108463.1-201ENST00000450258 347 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AC009244.1-201ENST00000450566 258 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.76□□□□□ -1.33
NFKB1P19838 MTCO3P20-201ENST00000454926 688 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 RPL18AP17-201ENST00000455326 198 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AC106822.1-201ENST00000502647 526 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.76□□□□□ -1.33
NFKB1P19838 HMGB1P28-201ENST00000507778 552 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AC048346.1-201ENST00000510247 144 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.76□□□□□ -1.33
NFKB1P19838 AC010493.1-201ENST00000513479 292 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 SCARNA11.1-201ENST00000516918 132 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
NFKB1P19838 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.76□□□□□ -1.33
NFKB1P19838 IGLV3-6-201ENST00000523937 250 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.76□□□□□ -1.33
NFKB1P19838 SLC2A13P1-201ENST00000531560 322 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NFKB1P19838 AC093027.1-201ENST00000546698 429 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.76□□□□□ -1.33
NFKB1P19838 AL390334.1-201ENST00000556395 450 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.76□□□□□ -1.33
NFKB1P19838 AC090515.3-201ENST00000560431 315 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.76□□□□□ -1.33
NFKB1P19838 ANP32BP1-202ENST00000568553 737 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.76□□□□□ -1.33
NFKB1P19838 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.76□□□□□ -1.33
NFKB1P19838 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.76□□□□□ -1.33
NFKB1P19838 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.76□□□□□ -1.33
NFKB1P19838 RPL12P25-202ENST00000598100 674 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.76□□□□□ -1.33
NFKB1P19838 AC013553.2-201ENST00000604244 589 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AL078624.2-201ENST00000605063 554 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.76□□□□□ -1.33
NFKB1P19838 AL137000.1-201ENST00000610528 1244 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AL132765.2-201ENST00000610812 351 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AC104010.1-201ENST00000616889 150 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 AC243756.2-201ENST00000618406 463 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
NFKB1P19838 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
NFKB1P19838 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NFKB1P19838 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
NFKB1P19838 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NFKB1P19838 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.76□□□□□ -1.33
NFKB1P19838 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NFKB1P19838 AC010168.2-201ENST00000562691 5428 ntBASIC6.76□□□□□ -1.33
NFKB1P19838 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
NFKB1P19838 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NFKB1P19838 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NFKB1P19838 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.76□□□□□ -1.33
NFKB1P19838 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.75□□□□□ -1.33
NFKB1P19838 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.75□□□□□ -1.33
NFKB1P19838 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.75□□□□□ -1.33
NFKB1P19838 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NFKB1P19838 CASC19-228ENST00000641414 1684 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NFKB1P19838 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
NFKB1P19838 Y_RNA.86-201ENST00000363020 111 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 RNA5SP382-201ENST00000363355 112 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 SNORA38B-201ENST00000363524 131 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 RNA5SP442-201ENST00000365050 107 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 RNA5SP355-201ENST00000365317 135 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 TMSB4XP8-201ENST00000402089 135 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 RN7SKP129-201ENST00000410288 299 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.75□□□□□ -1.33
NFKB1P19838 TMSB4XP6-201ENST00000415187 135 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 AC114814.2-201ENST00000419195 485 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC6.75□□□□□ -1.33
NFKB1P19838 AL672212.1-201ENST00000422246 400 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 TMSB4XP1-201ENST00000424567 135 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 MTCO2P12-201ENST00000427426 682 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 AC009961.2-201ENST00000435771 251 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 USP9YP15-201ENST00000442391 422 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC6.75□□□□□ -1.33
NFKB1P19838 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.75□□□□□ -1.33
NFKB1P19838 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.75□□□□□ -1.33
NFKB1P19838 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC6.75□□□□□ -1.33
NFKB1P19838 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.75□□□□□ -1.33
NFKB1P19838 TREML3P-201ENST00000457327 501 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.75□□□□□ -1.33
NFKB1P19838 FAM172BP-201ENST00000487497 1089 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 THAP6-203ENST00000502620 582 ntTSL 3 BASIC6.75□□□□□ -1.33
NFKB1P19838 AC008629.2-201ENST00000503783 483 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 AC083906.1-201ENST00000509298 406 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 AL390198.2-201ENST00000510553 222 ntBASIC6.75□□□□□ -1.33
NFKB1P19838 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.75□□□□□ -1.33
NFKB1P19838 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.75□□□□□ -1.33
NFKB1P19838 HSPA8P13-201ENST00000523715 472 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms