Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RPS3AP54-201ENST00000435535 734 ntBASIC4.66□□□□□ -1.66
HMGA1P17096 AL161747.1-201ENST00000480068 358 ntBASIC4.66□□□□□ -1.66
HMGA1P17096 AC091167.1-201ENST00000492017 396 ntBASIC4.66□□□□□ -1.66
HMGA1P17096 TOMM20P2-201ENST00000540082 421 ntBASIC4.66□□□□□ -1.66
HMGA1P17096 LSM3P2-201ENST00000551246 273 ntBASIC4.66□□□□□ -1.66
HMGA1P17096 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGA1P17096 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMGA1P17096 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGA1P17096 AL022393.1-201ENST00000625142 1677 ntBASIC4.66□□□□□ -1.66
HMGA1P17096 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
HMGA1P17096 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
HMGA1P17096 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
HMGA1P17096 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGA1P17096 AL731566.1-201ENST00000620490 1937 ntBASIC4.66□□□□□ -1.66
HMGA1P17096 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMGA1P17096 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
HMGA1P17096 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
HMGA1P17096 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
HMGA1P17096 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HMGA1P17096 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
HMGA1P17096 RNU1-132P-201ENST00000364300 164 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 RNA5SP366-201ENST00000365454 123 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.65□□□□□ -1.67
HMGA1P17096 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HMGA1P17096 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGA1P17096 AC007064.3-201ENST00000422608 359 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 Z74021.1-201ENST00000423610 407 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HMGA1P17096 RPS26P4-201ENST00000431743 355 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGA1P17096 ACTR3P2-201ENST00000439585 1257 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGA1P17096 NUTF2P3-201ENST00000448540 384 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 RPL7P32-201ENST00000457119 744 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 RPS27AP17-201ENST00000463344 455 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGA1P17096 AC041039.1-201ENST00000485656 536 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.65□□□□□ -1.67
HMGA1P17096 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGA1P17096 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.65□□□□□ -1.67
HMGA1P17096 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGA1P17096 SS18L2P2-201ENST00000583960 235 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGA1P17096 AC079587.1-201ENST00000603846 277 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 AC113403.1-201ENST00000604910 193 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 AC091979.2-201ENST00000607514 214 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 uc_338.13-201ENST00000618243 179 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 AL023881.1-201ENST00000621088 301 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 AC139769.1-204ENST00000472297 1931 ntBASIC4.65□□□□□ -1.67
HMGA1P17096 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HMGA1P17096 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
HMGA1P17096 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGA1P17096 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGA1P17096 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
HMGA1P17096 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGA1P17096 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.64□□□□□ -1.67
HMGA1P17096 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGA1P17096 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGA1P17096 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.64□□□□□ -1.67
HMGA1P17096 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGA1P17096 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGA1P17096 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HMGA1P17096 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGA1P17096 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGA1P17096 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGA1P17096 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGA1P17096 RNA5SP151-201ENST00000365632 117 ntBASIC4.64□□□□□ -1.67
HMGA1P17096 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGA1P17096 EI24P3-201ENST00000399046 1062 ntBASIC4.64□□□□□ -1.67
HMGA1P17096 PEX12P1-201ENST00000400284 1048 ntBASIC4.64□□□□□ -1.67
HMGA1P17096 SNORA11F-201ENST00000408237 128 ntBASIC4.64□□□□□ -1.67
HMGA1P17096 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGA1P17096 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGA1P17096 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGA1P17096 GTF2IP2-201ENST00000424290 697 ntBASIC4.64□□□□□ -1.67
HMGA1P17096 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.64□□□□□ -1.67
HMGA1P17096 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGA1P17096 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGA1P17096 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGA1P17096 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGA1P17096 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGA1P17096 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGA1P17096 RNA5SP446-201ENST00000515955 82 ntBASIC4.64□□□□□ -1.67
HMGA1P17096 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGA1P17096 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.64□□□□□ -1.67
HMGA1P17096 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGA1P17096 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.64□□□□□ -1.67
HMGA1P17096 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.64□□□□□ -1.67
HMGA1P17096 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.64□□□□□ -1.67
HMGA1P17096 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGA1P17096 AC011477.5-201ENST00000586571 259 ntBASIC4.64□□□□□ -1.67
HMGA1P17096 ARF4P1-201ENST00000605447 541 ntBASIC4.64□□□□□ -1.67
HMGA1P17096 COX6CP4-201ENST00000605798 228 ntBASIC4.64□□□□□ -1.67
HMGA1P17096 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGA1P17096 MIR3653-201ENST00000625572 110 ntBASIC4.64□□□□□ -1.67
HMGA1P17096 AC068724.3-201ENST00000625906 87 ntBASIC4.64□□□□□ -1.67
HMGA1P17096 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGA1P17096 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGA1P17096 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms