Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 TRAV11-201ENST00000539512 339 ntBASIC4.46□□□□□ -1.7
NCK1P16333 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.46□□□□□ -1.7
NCK1P16333 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.46□□□□□ -1.7
NCK1P16333 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.46□□□□□ -1.7
NCK1P16333 RN7SL176P-201ENST00000580352 264 ntBASIC4.46□□□□□ -1.7
NCK1P16333 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.46□□□□□ -1.7
NCK1P16333 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.46□□□□□ -1.7
NCK1P16333 HMGB1P51-201ENST00000605166 638 ntBASIC4.46□□□□□ -1.7
NCK1P16333 AL121932.1-201ENST00000605542 214 ntBASIC4.46□□□□□ -1.7
NCK1P16333 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.46□□□□□ -1.7
NCK1P16333 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.46□□□□□ -1.7
NCK1P16333 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NCK1P16333 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
NCK1P16333 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.46□□□□□ -1.7
NCK1P16333 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.46□□□□□ -1.7
NCK1P16333 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.46□□□□□ -1.7
NCK1P16333 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NCK1P16333 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NCK1P16333 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.46□□□□□ -1.7
NCK1P16333 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NCK1P16333 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.45□□□□□ -1.7
NCK1P16333 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
NCK1P16333 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NCK1P16333 OR56B2P-201ENST00000317102 954 ntBASIC4.45□□□□□ -1.7
NCK1P16333 RNA5SP428-201ENST00000365129 132 ntBASIC4.45□□□□□ -1.7
NCK1P16333 SNORA70-201ENST00000384436 135 ntBASIC4.45□□□□□ -1.7
NCK1P16333 MIR7-1-201ENST00000384871 110 ntBASIC4.45□□□□□ -1.7
NCK1P16333 MIR323B-201ENST00000385269 82 ntBASIC4.45□□□□□ -1.7
NCK1P16333 AC092642.1-201ENST00000392417 425 ntBASIC4.45□□□□□ -1.7
NCK1P16333 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.45□□□□□ -1.7
NCK1P16333 AL034374.1-201ENST00000406329 351 ntBASIC4.45□□□□□ -1.7
NCK1P16333 RNA5SP146-201ENST00000410743 123 ntBASIC4.45□□□□□ -1.7
NCK1P16333 RN7SKP247-201ENST00000411094 308 ntBASIC4.45□□□□□ -1.7
NCK1P16333 OR13Z1P-201ENST00000416141 834 ntBASIC4.45□□□□□ -1.7
NCK1P16333 RPA2P2-201ENST00000419698 796 ntBASIC4.45□□□□□ -1.7
NCK1P16333 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.45□□□□□ -1.7
NCK1P16333 NDUFA5P8-201ENST00000449019 346 ntBASIC4.45□□□□□ -1.7
NCK1P16333 AC023141.9-201ENST00000458734 412 ntBASIC4.45□□□□□ -1.7
NCK1P16333 AP000942.1-201ENST00000463969 747 ntBASIC4.45□□□□□ -1.7
NCK1P16333 RN7SL717P-201ENST00000478343 297 ntBASIC4.45□□□□□ -1.7
NCK1P16333 RN7SL319P-201ENST00000480656 221 ntBASIC4.45□□□□□ -1.7
NCK1P16333 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.45□□□□□ -1.7
NCK1P16333 AC108693.1-201ENST00000496068 432 ntBASIC4.45□□□□□ -1.7
NCK1P16333 AC090568.1-201ENST00000509499 856 ntBASIC4.45□□□□□ -1.7
NCK1P16333 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.45□□□□□ -1.7
NCK1P16333 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.45□□□□□ -1.7
NCK1P16333 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NCK1P16333 AC090888.3-201ENST00000558917 509 ntBASIC4.45□□□□□ -1.7
NCK1P16333 AC009268.1-201ENST00000561352 1203 ntBASIC4.45□□□□□ -1.7
NCK1P16333 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.45□□□□□ -1.7
NCK1P16333 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.45□□□□□ -1.7
NCK1P16333 MIR3614-201ENST00000581261 86 ntBASIC4.45□□□□□ -1.7
NCK1P16333 MIR4691-201ENST00000583764 85 ntBASIC4.45□□□□□ -1.7
NCK1P16333 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.45□□□□□ -1.7
NCK1P16333 SLC25A36P1-201ENST00000590111 465 ntBASIC4.45□□□□□ -1.7
NCK1P16333 AC068020.1-201ENST00000594215 661 ntBASIC4.45□□□□□ -1.7
NCK1P16333 AC126915.2-201ENST00000610957 190 ntBASIC4.45□□□□□ -1.7
NCK1P16333 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.45□□□□□ -1.7
NCK1P16333 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.45□□□□□ -1.7
NCK1P16333 AC019080.5-201ENST00000624891 757 ntBASIC4.45□□□□□ -1.7
NCK1P16333 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.45□□□□□ -1.7
NCK1P16333 AL596275.2-204ENST00000641628 552 ntBASIC4.45□□□□□ -1.7
NCK1P16333 CASC19-264ENST00000641912 1184 ntBASIC4.45□□□□□ -1.7
NCK1P16333 AL596275.2-206ENST00000641957 626 ntBASIC4.45□□□□□ -1.7
NCK1P16333 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.45□□□□□ -1.7
NCK1P16333 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NCK1P16333 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NCK1P16333 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.45□□□□□ -1.7
NCK1P16333 AL450326.2-201ENST00000421913 1962 ntBASIC4.45□□□□□ -1.7
NCK1P16333 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NCK1P16333 AL355852.1-201ENST00000454081 1771 ntBASIC4.45□□□□□ -1.7
NCK1P16333 AL451142.2-201ENST00000429076 2090 ntBASIC4.44□□□□□ -1.7
NCK1P16333 HSPD1P11-201ENST00000508643 1702 ntBASIC4.44□□□□□ -1.7
NCK1P16333 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NCK1P16333 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NCK1P16333 RNA5SP132-201ENST00000364725 118 ntBASIC4.44□□□□□ -1.7
NCK1P16333 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NCK1P16333 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.44□□□□□ -1.7
NCK1P16333 MIR921-201ENST00000401133 56 ntBASIC4.44□□□□□ -1.7
NCK1P16333 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NCK1P16333 RNA5SP178-201ENST00000410380 128 ntBASIC4.44□□□□□ -1.7
NCK1P16333 RPL21P108-201ENST00000413857 481 ntBASIC4.44□□□□□ -1.7
NCK1P16333 CEACAMP8-201ENST00000413902 580 ntBASIC4.44□□□□□ -1.7
NCK1P16333 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.44□□□□□ -1.7
NCK1P16333 AC005033.1-201ENST00000428904 813 ntBASIC4.44□□□□□ -1.7
NCK1P16333 RPS29P14-201ENST00000431518 171 ntBASIC4.44□□□□□ -1.7
NCK1P16333 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.44□□□□□ -1.7
NCK1P16333 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.44□□□□□ -1.7
NCK1P16333 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.44□□□□□ -1.7
NCK1P16333 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.44□□□□□ -1.7
NCK1P16333 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
NCK1P16333 RPL7P39-201ENST00000481157 744 ntBASIC4.44□□□□□ -1.7
NCK1P16333 RN7SL214P-201ENST00000487317 265 ntBASIC4.44□□□□□ -1.7
NCK1P16333 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.44□□□□□ -1.7
NCK1P16333 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NCK1P16333 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.44□□□□□ -1.7
NCK1P16333 MTATP6P1-201ENST00000514057 681 ntBASIC4.44□□□□□ -1.7
NCK1P16333 AC034244.2-201ENST00000514668 858 ntBASIC4.44□□□□□ -1.7
NCK1P16333 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.44□□□□□ -1.7
NCK1P16333 HMGB1P19-201ENST00000517578 577 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms