Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 RNA5SP500-201ENST00000364486 119 ntBASIC6.92□□□□□ -1.3
BMP3P12645 RNY3P10-201ENST00000384764 102 ntBASIC6.92□□□□□ -1.3
BMP3P12645 SNORD65C-201ENST00000390962 71 ntBASIC6.92□□□□□ -1.3
BMP3P12645 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
BMP3P12645 RPL17P50-201ENST00000396131 546 ntBASIC6.92□□□□□ -1.3
BMP3P12645 RPS3AP2-201ENST00000407190 754 ntBASIC6.92□□□□□ -1.3
BMP3P12645 RN7SKP151-201ENST00000410230 316 ntBASIC6.92□□□□□ -1.3
BMP3P12645 RN7SKP206-201ENST00000410823 293 ntBASIC6.92□□□□□ -1.3
BMP3P12645 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.92□□□□□ -1.3
BMP3P12645 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.92□□□□□ -1.3
BMP3P12645 Z97055.1-201ENST00000419730 712 ntBASIC6.92□□□□□ -1.3
BMP3P12645 CNOT7P1-201ENST00000429006 852 ntBASIC6.92□□□□□ -1.3
BMP3P12645 AL136231.1-201ENST00000429407 730 ntBASIC6.92□□□□□ -1.3
BMP3P12645 AL592437.1-201ENST00000443781 492 ntBASIC6.92□□□□□ -1.3
BMP3P12645 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.92□□□□□ -1.3
BMP3P12645 AL050341.1-201ENST00000447743 313 ntBASIC6.92□□□□□ -1.3
BMP3P12645 NANOGNBP1-201ENST00000448444 480 ntBASIC6.92□□□□□ -1.3
BMP3P12645 SDC4P-201ENST00000453285 601 ntBASIC6.92□□□□□ -1.3
BMP3P12645 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.92□□□□□ -1.3
BMP3P12645 TMED11P-201ENST00000479478 690 ntBASIC6.92□□□□□ -1.3
BMP3P12645 CCDC11P1-201ENST00000503137 1162 ntBASIC6.92□□□□□ -1.3
BMP3P12645 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BMP3P12645 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.92□□□□□ -1.3
BMP3P12645 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC6.92□□□□□ -1.3
BMP3P12645 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.92□□□□□ -1.3
BMP3P12645 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.92□□□□□ -1.3
BMP3P12645 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.92□□□□□ -1.3
BMP3P12645 AC027667.1-201ENST00000545814 304 ntBASIC6.92□□□□□ -1.3
BMP3P12645 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.92□□□□□ -1.3
BMP3P12645 OR11J2P-201ENST00000555298 907 ntBASIC6.92□□□□□ -1.3
BMP3P12645 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.92□□□□□ -1.3
BMP3P12645 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC6.92□□□□□ -1.3
BMP3P12645 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.92□□□□□ -1.3
BMP3P12645 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC6.92□□□□□ -1.3
BMP3P12645 AL683813.2-201ENST00000605245 502 ntBASIC6.92□□□□□ -1.3
BMP3P12645 BX323046.1-201ENST00000610145 535 ntBASIC6.92□□□□□ -1.3
BMP3P12645 AL589743.7-201ENST00000612637 233 ntBASIC6.92□□□□□ -1.3
BMP3P12645 AL357080.1-201ENST00000617394 239 ntBASIC6.92□□□□□ -1.3
BMP3P12645 AP002505.2-201ENST00000623585 696 ntBASIC6.92□□□□□ -1.3
BMP3P12645 AL034408.1-201ENST00000637712 664 ntBASIC6.92□□□□□ -1.3
BMP3P12645 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.92□□□□□ -1.3
BMP3P12645 MIR4302-201ENST00000638058 60 ntBASIC6.92□□□□□ -1.3
BMP3P12645 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
BMP3P12645 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BMP3P12645 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BMP3P12645 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BMP3P12645 AC009831.5-201ENST00000624000 3189 ntBASIC6.92□□□□□ -1.3
BMP3P12645 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
BMP3P12645 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BMP3P12645 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BMP3P12645 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
BMP3P12645 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
BMP3P12645 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
BMP3P12645 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
BMP3P12645 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
BMP3P12645 AC009779.8-201ENST00000641684 4384 ntBASIC6.92□□□□□ -1.3
BMP3P12645 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BMP3P12645 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.91□□□□□ -1.3
BMP3P12645 TTC39DP-201ENST00000416781 1688 ntBASIC6.91□□□□□ -1.3
BMP3P12645 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BMP3P12645 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
BMP3P12645 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
BMP3P12645 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
BMP3P12645 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
BMP3P12645 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BMP3P12645 OR7E101P-201ENST00000400428 513 ntBASIC6.91□□□□□ -1.3
BMP3P12645 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.91□□□□□ -1.3
BMP3P12645 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.91□□□□□ -1.3
BMP3P12645 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.91□□□□□ -1.3
BMP3P12645 TCEA1P3-201ENST00000443005 880 ntBASIC6.91□□□□□ -1.3
BMP3P12645 HMGN1P36-201ENST00000446623 298 ntBASIC6.91□□□□□ -1.3
BMP3P12645 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.91□□□□□ -1.3
BMP3P12645 RPL36AP33-201ENST00000450395 310 ntBASIC6.91□□□□□ -1.3
BMP3P12645 RPL21P134-201ENST00000453468 483 ntBASIC6.91□□□□□ -1.3
BMP3P12645 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC6.91□□□□□ -1.3
BMP3P12645 RN7SL273P-201ENST00000481561 299 ntBASIC6.91□□□□□ -1.3
BMP3P12645 AC008628.2-201ENST00000502605 298 ntBASIC6.91□□□□□ -1.3
BMP3P12645 AC147055.4-201ENST00000504399 745 ntBASIC6.91□□□□□ -1.3
BMP3P12645 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.91□□□□□ -1.3
BMP3P12645 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
BMP3P12645 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.91□□□□□ -1.3
BMP3P12645 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC6.91□□□□□ -1.3
BMP3P12645 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.91□□□□□ -1.3
BMP3P12645 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC6.91□□□□□ -1.3
BMP3P12645 DEFB108A-201ENST00000530110 222 ntBASIC6.91□□□□□ -1.3
BMP3P12645 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.91□□□□□ -1.3
BMP3P12645 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.91□□□□□ -1.3
BMP3P12645 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
BMP3P12645 AC007494.1-201ENST00000562293 760 ntBASIC6.91□□□□□ -1.3
BMP3P12645 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.91□□□□□ -1.3
BMP3P12645 MIR4301-201ENST00000577203 66 ntBASIC6.91□□□□□ -1.3
BMP3P12645 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC6.91□□□□□ -1.3
BMP3P12645 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BMP3P12645 AC011445.2-201ENST00000599274 173 ntBASIC6.91□□□□□ -1.3
BMP3P12645 FAM27E4-201ENST00000605259 342 ntBASIC6.91□□□□□ -1.3
BMP3P12645 AC068276.1-201ENST00000605793 379 ntBASIC6.91□□□□□ -1.3
BMP3P12645 AL390208.1-201ENST00000605885 644 ntBASIC6.91□□□□□ -1.3
BMP3P12645 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BMP3P12645 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
BMP3P12645 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms