Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC2.73□□□□□ -1.97
APOBP04114 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC2.73□□□□□ -1.97
APOBP04114 AC093591.2-201ENST00000565254 3843 ntBASIC2.73□□□□□ -1.97
APOBP04114 ADAD1P2-201ENST00000588476 646 ntBASIC2.73□□□□□ -1.97
APOBP04114 AC005000.2-201ENST00000605468 310 ntBASIC2.73□□□□□ -1.97
APOBP04114 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC2.73□□□□□ -1.97
APOBP04114 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC2.73□□□□□ -1.97
APOBP04114 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC2.73□□□□□ -1.97
APOBP04114 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
APOBP04114 RPL21P67-201ENST00000402896 478 ntBASIC2.73□□□□□ -1.97
APOBP04114 AC068533.1-201ENST00000418542 415 ntBASIC2.73□□□□□ -1.97
APOBP04114 OR4F13P-201ENST00000428478 931 ntBASIC2.73□□□□□ -1.97
APOBP04114 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC2.73□□□□□ -1.97
APOBP04114 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC2.73□□□□□ -1.97
APOBP04114 RHEBP2-201ENST00000450289 600 ntBASIC2.73□□□□□ -1.97
APOBP04114 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.73□□□□□ -1.97
APOBP04114 RNA5SP49-201ENST00000516450 115 ntBASIC2.73□□□□□ -1.97
APOBP04114 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
APOBP04114 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 AL021997.2-201ENST00000615674 271 ntBASIC2.73□□□□□ -1.97
APOBP04114 AC084757.4-201ENST00000616350 526 ntBASIC2.73□□□□□ -1.97
APOBP04114 TMEM30CP-203ENST00000637814 1035 ntBASIC2.73□□□□□ -1.97
APOBP04114 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC2.73□□□□□ -1.97
APOBP04114 ALB-202ENST00000401494 1659 ntTSL 5 BASIC2.73□□□□□ -1.97
APOBP04114 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 AL161912.2-201ENST00000565707 3007 ntBASIC2.73□□□□□ -1.97
APOBP04114 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
APOBP04114 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
APOBP04114 CCAT2-201ENST00000630920 1752 ntBASIC2.73□□□□□ -1.97
APOBP04114 AC115285.1-201ENST00000424879 736 ntBASIC2.73□□□□□ -1.97
APOBP04114 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC2.73□□□□□ -1.97
APOBP04114 ABCF2P2-201ENST00000450549 296 ntBASIC2.73□□□□□ -1.97
APOBP04114 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC2.73□□□□□ -1.97
APOBP04114 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.73□□□□□ -1.97
APOBP04114 AC008013.2-202ENST00000637965 364 ntBASIC2.73□□□□□ -1.97
APOBP04114 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
APOBP04114 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 AC024560.2-201ENST00000507981 1497 ntBASIC2.73□□□□□ -1.97
APOBP04114 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC2.73□□□□□ -1.97
APOBP04114 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 ZNF285B-201ENST00000561698 1767 ntBASIC2.73□□□□□ -1.97
APOBP04114 OR51H2P-202ENST00000641424 3046 ntBASIC2.73□□□□□ -1.97
APOBP04114 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.73□□□□□ -1.97
APOBP04114 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.73□□□□□ -1.97
APOBP04114 HMGN1P15-201ENST00000513870 295 ntBASIC2.73□□□□□ -1.97
APOBP04114 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC2.73□□□□□ -1.97
APOBP04114 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
APOBP04114 NBPF8-201ENST00000583271 5330 ntBASIC2.73□□□□□ -1.97
APOBP04114 AL929601.4-201ENST00000613011 1341 ntBASIC2.72□□□□□ -1.97
APOBP04114 AC100778.3-201ENST00000580060 1750 ntBASIC2.72□□□□□ -1.97
APOBP04114 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC2.72□□□□□ -1.97
APOBP04114 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
APOBP04114 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
APOBP04114 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC2.72□□□□□ -1.97
APOBP04114 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
APOBP04114 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
APOBP04114 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
APOBP04114 MIR331-201ENST00000362302 94 ntBASIC2.72□□□□□ -1.97
APOBP04114 RNA5SP307-201ENST00000362863 116 ntBASIC2.72□□□□□ -1.97
APOBP04114 KRR1P1-201ENST00000419430 803 ntBASIC2.72□□□□□ -1.97
APOBP04114 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC2.72□□□□□ -1.97
APOBP04114 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC2.72□□□□□ -1.97
APOBP04114 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC2.72□□□□□ -1.97
APOBP04114 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC2.72□□□□□ -1.97
APOBP04114 AC092354.2-201ENST00000607786 514 ntBASIC2.72□□□□□ -1.97
APOBP04114 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
APOBP04114 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
APOBP04114 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
APOBP04114 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC2.72□□□□□ -1.97
APOBP04114 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
APOBP04114 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
APOBP04114 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
APOBP04114 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.72□□□□□ -1.97
APOBP04114 RPEP2-201ENST00000432149 701 ntBASIC2.72□□□□□ -1.97
APOBP04114 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.72□□□□□ -1.97
APOBP04114 PTMAP3-201ENST00000447474 330 ntBASIC2.72□□□□□ -1.97
APOBP04114 ALG13-211ENST00000473389 693 ntTSL 2 BASIC2.72□□□□□ -1.97
APOBP04114 MIR5684-201ENST00000585074 65 ntBASIC2.72□□□□□ -1.97
APOBP04114 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
APOBP04114 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
APOBP04114 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC2.72□□□□□ -1.97
APOBP04114 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC2.72□□□□□ -1.97
APOBP04114 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
APOBP04114 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
APOBP04114 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
APOBP04114 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms