Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AL022401.1-201ENST00000619498 108 ntBASIC7.39□□□□□ -1.23
RAPGEF3O95398 AL049536.1-201ENST00000625043 744 ntBASIC7.39□□□□□ -1.23
RAPGEF3O95398 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.39□□□□□ -1.23
RAPGEF3O95398 AC013437.2-201ENST00000639587 677 ntBASIC7.39□□□□□ -1.23
RAPGEF3O95398 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RAPGEF3O95398 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
RAPGEF3O95398 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RAPGEF3O95398 AP000756.2-201ENST00000624168 2567 ntBASIC7.39□□□□□ -1.23
RAPGEF3O95398 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RAPGEF3O95398 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC7.39□□□□□ -1.23
RAPGEF3O95398 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RAPGEF3O95398 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RAPGEF3O95398 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RAPGEF3O95398 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RAPGEF3O95398 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 AC017104.4-201ENST00000636283 1592 ntBASIC7.38□□□□□ -1.23
RAPGEF3O95398 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RAPGEF3O95398 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RAPGEF3O95398 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RAPGEF3O95398 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 AL357515.1-201ENST00000402967 542 ntBASIC7.38□□□□□ -1.23
RAPGEF3O95398 GPS2P1-201ENST00000411761 986 ntBASIC7.38□□□□□ -1.23
RAPGEF3O95398 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 AC004854.1-201ENST00000440356 349 ntBASIC7.38□□□□□ -1.23
RAPGEF3O95398 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RAPGEF3O95398 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RAPGEF3O95398 HMGB1P3-201ENST00000502802 616 ntBASIC7.38□□□□□ -1.23
RAPGEF3O95398 AC098862.1-201ENST00000504991 413 ntBASIC7.38□□□□□ -1.23
RAPGEF3O95398 RNU5A-7P-201ENST00000515979 116 ntBASIC7.38□□□□□ -1.23
RAPGEF3O95398 SNORA67.7-201ENST00000516664 135 ntBASIC7.38□□□□□ -1.23
RAPGEF3O95398 AC067904.2-201ENST00000517322 1283 ntBASIC7.38□□□□□ -1.23
RAPGEF3O95398 MTND2P32-201ENST00000521584 1038 ntBASIC7.38□□□□□ -1.23
RAPGEF3O95398 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RAPGEF3O95398 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 AC009712.1-201ENST00000564938 316 ntBASIC7.38□□□□□ -1.23
RAPGEF3O95398 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 AC011477.5-201ENST00000586571 259 ntBASIC7.38□□□□□ -1.23
RAPGEF3O95398 AC012213.4-201ENST00000606457 354 ntBASIC7.38□□□□□ -1.23
RAPGEF3O95398 AC007275.1-201ENST00000621243 671 ntBASIC7.38□□□□□ -1.23
RAPGEF3O95398 AC034229.5-201ENST00000624258 185 ntBASIC7.38□□□□□ -1.23
RAPGEF3O95398 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RAPGEF3O95398 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RAPGEF3O95398 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RAPGEF3O95398 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.38□□□□□ -1.23
RAPGEF3O95398 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RAPGEF3O95398 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC7.37□□□□□ -1.23
RAPGEF3O95398 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RAPGEF3O95398 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC7.37□□□□□ -1.23
RAPGEF3O95398 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7.37□□□□□ -1.23
RAPGEF3O95398 RPS21P8-201ENST00000413365 247 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 AL645608.4-201ENST00000423619 154 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 MTND4LP13-201ENST00000425022 298 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 AC013262.1-201ENST00000426710 252 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.37□□□□□ -1.23
RAPGEF3O95398 AC007563.3-201ENST00000433233 371 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC7.37□□□□□ -1.23
RAPGEF3O95398 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC7.37□□□□□ -1.23
RAPGEF3O95398 RPL23AP24-201ENST00000458203 385 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC7.37□□□□□ -1.23
RAPGEF3O95398 SSR3-206ENST00000476217 807 ntTSL 3 BASIC7.37□□□□□ -1.23
RAPGEF3O95398 AC073358.1-201ENST00000505671 684 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 AC104115.2-201ENST00000523026 687 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC7.37□□□□□ -1.23
RAPGEF3O95398 NOP56P3-201ENST00000549457 385 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 MIR4444-1-201ENST00000581696 74 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.37□□□□□ -1.23
RAPGEF3O95398 MIR4444-2-201ENST00000584390 74 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC7.37□□□□□ -1.23
RAPGEF3O95398 AC023762.1-201ENST00000603280 584 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 AL357094.1-201ENST00000603845 844 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RAPGEF3O95398 AP004372.1-201ENST00000604842 844 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 ARF4P1-201ENST00000605447 541 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 AC090948.2-201ENST00000607363 564 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 BNIP3P41-202ENST00000616656 861 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 AL445567.2-201ENST00000618935 498 ntBASIC7.37□□□□□ -1.23
RAPGEF3O95398 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RAPGEF3O95398 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC7.37□□□□□ -1.23
RAPGEF3O95398 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC7.37□□□□□ -1.23
RAPGEF3O95398 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RAPGEF3O95398 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RAPGEF3O95398 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RAPGEF3O95398 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RAPGEF3O95398 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RAPGEF3O95398 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
RAPGEF3O95398 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms