Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
MBD4O95243 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.89□□□□□ -1.47
MBD4O95243 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.89□□□□□ -1.47
MBD4O95243 AC233266.2-201ENST00000567067 528 ntBASIC5.89□□□□□ -1.47
MBD4O95243 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.89□□□□□ -1.47
MBD4O95243 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.89□□□□□ -1.47
MBD4O95243 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.89□□□□□ -1.47
MBD4O95243 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.89□□□□□ -1.47
MBD4O95243 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.89□□□□□ -1.47
MBD4O95243 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.89□□□□□ -1.47
MBD4O95243 AL022401.1-201ENST00000619498 108 ntBASIC5.89□□□□□ -1.47
MBD4O95243 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
MBD4O95243 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
MBD4O95243 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.89□□□□□ -1.47
MBD4O95243 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.89□□□□□ -1.47
MBD4O95243 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
MBD4O95243 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
MBD4O95243 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MBD4O95243 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
MBD4O95243 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
MBD4O95243 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
MBD4O95243 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MBD4O95243 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
MBD4O95243 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MBD4O95243 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MBD4O95243 RNA5SP87-201ENST00000384155 118 ntBASIC5.88□□□□□ -1.47
MBD4O95243 RNA5SP187-201ENST00000384400 119 ntBASIC5.88□□□□□ -1.47
MBD4O95243 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.88□□□□□ -1.47
MBD4O95243 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.88□□□□□ -1.47
MBD4O95243 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.88□□□□□ -1.47
MBD4O95243 AC006466.1-201ENST00000438721 289 ntBASIC5.88□□□□□ -1.47
MBD4O95243 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.88□□□□□ -1.47
MBD4O95243 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.88□□□□□ -1.47
MBD4O95243 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.88□□□□□ -1.47
MBD4O95243 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MBD4O95243 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.88□□□□□ -1.47
MBD4O95243 AC103833.1-201ENST00000517442 172 ntBASIC5.88□□□□□ -1.47
MBD4O95243 HIGD1AP18-201ENST00000520730 278 ntBASIC5.88□□□□□ -1.47
MBD4O95243 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.88□□□□□ -1.47
MBD4O95243 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
MBD4O95243 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.88□□□□□ -1.47
MBD4O95243 SULT1C2P2-201ENST00000562517 294 ntBASIC5.88□□□□□ -1.47
MBD4O95243 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.88□□□□□ -1.47
MBD4O95243 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.88□□□□□ -1.47
MBD4O95243 MIR4737-201ENST00000583979 81 ntBASIC5.88□□□□□ -1.47
MBD4O95243 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.88□□□□□ -1.47
MBD4O95243 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.88□□□□□ -1.47
MBD4O95243 AC135178.6-201ENST00000605314 398 ntBASIC5.88□□□□□ -1.47
MBD4O95243 AC004775.1-201ENST00000607389 753 ntBASIC5.88□□□□□ -1.47
MBD4O95243 AL645927.2-201ENST00000618350 349 ntBASIC5.88□□□□□ -1.47
MBD4O95243 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
MBD4O95243 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.88□□□□□ -1.47
MBD4O95243 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.88□□□□□ -1.47
MBD4O95243 AL359715.4-201ENST00000606629 1436 ntBASIC5.88□□□□□ -1.47
MBD4O95243 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MBD4O95243 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MBD4O95243 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
MBD4O95243 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
MBD4O95243 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MBD4O95243 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.87□□□□□ -1.47
MBD4O95243 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
MBD4O95243 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MBD4O95243 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
MBD4O95243 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MBD4O95243 RNU6-666P-201ENST00000363499 107 ntBASIC5.87□□□□□ -1.47
MBD4O95243 AL035419.1-201ENST00000397037 564 ntBASIC5.87□□□□□ -1.47
MBD4O95243 RN7SKP222-201ENST00000410651 315 ntBASIC5.87□□□□□ -1.47
MBD4O95243 RNA5SP498-201ENST00000411342 120 ntBASIC5.87□□□□□ -1.47
MBD4O95243 AL357078.2-201ENST00000416486 427 ntBASIC5.87□□□□□ -1.47
MBD4O95243 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.87□□□□□ -1.47
MBD4O95243 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
MBD4O95243 AC007559.1-201ENST00000428736 355 ntBASIC5.87□□□□□ -1.47
MBD4O95243 AC023141.6-201ENST00000429418 337 ntBASIC5.87□□□□□ -1.47
MBD4O95243 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.87□□□□□ -1.47
MBD4O95243 SLC25A18P1-201ENST00000449385 454 ntBASIC5.87□□□□□ -1.47
MBD4O95243 NPM1P39-201ENST00000449818 867 ntBASIC5.87□□□□□ -1.47
MBD4O95243 AC234781.3-201ENST00000452540 973 ntBASIC5.87□□□□□ -1.47
MBD4O95243 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.87□□□□□ -1.47
MBD4O95243 MTND2P30-201ENST00000456663 382 ntBASIC5.87□□□□□ -1.47
MBD4O95243 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.87□□□□□ -1.47
MBD4O95243 RPL7AP10-201ENST00000481016 791 ntBASIC5.87□□□□□ -1.47
MBD4O95243 AC006349.1-201ENST00000555526 235 ntBASIC5.87□□□□□ -1.47
MBD4O95243 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.87□□□□□ -1.47
MBD4O95243 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.87□□□□□ -1.47
MBD4O95243 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.87□□□□□ -1.47
MBD4O95243 MIR3667-201ENST00000581025 74 ntBASIC5.87□□□□□ -1.47
MBD4O95243 AL671309.1-201ENST00000603750 544 ntBASIC5.87□□□□□ -1.47
MBD4O95243 AL049844.2-201ENST00000604280 628 ntBASIC5.87□□□□□ -1.47
MBD4O95243 AC012557.1-201ENST00000607115 611 ntBASIC5.87□□□□□ -1.47
MBD4O95243 AL023583.1-201ENST00000607518 1143 ntBASIC5.87□□□□□ -1.47
MBD4O95243 AC023813.4-201ENST00000607580 580 ntBASIC5.87□□□□□ -1.47
MBD4O95243 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.87□□□□□ -1.47
MBD4O95243 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.87□□□□□ -1.47
MBD4O95243 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
MBD4O95243 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.87□□□□□ -1.47
MBD4O95243 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MBD4O95243 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
MBD4O95243 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
MBD4O95243 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.87□□□□□ -1.47
MBD4O95243 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms