Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 VN1R42P-201ENST00000424651 344 ntBASIC4.67□□□□□ -1.66
PRKNO60260 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.67□□□□□ -1.66
PRKNO60260 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.67□□□□□ -1.66
PRKNO60260 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.67□□□□□ -1.66
PRKNO60260 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.67□□□□□ -1.66
PRKNO60260 PRPF38AP1-201ENST00000451976 933 ntBASIC4.67□□□□□ -1.66
PRKNO60260 OFD1P3Y-201ENST00000453312 783 ntBASIC4.67□□□□□ -1.66
PRKNO60260 AC245028.2-201ENST00000458673 253 ntBASIC4.67□□□□□ -1.66
PRKNO60260 RPL35AP28-201ENST00000459730 331 ntBASIC4.67□□□□□ -1.66
PRKNO60260 RN7SL244P-201ENST00000493405 297 ntBASIC4.67□□□□□ -1.66
PRKNO60260 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.67□□□□□ -1.66
PRKNO60260 TRAV31-201ENST00000502780 342 ntBASIC4.67□□□□□ -1.66
PRKNO60260 PRELID3BP6-201ENST00000503839 571 ntBASIC4.67□□□□□ -1.66
PRKNO60260 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.67□□□□□ -1.66
PRKNO60260 AP001372.4-201ENST00000524889 472 ntBASIC4.67□□□□□ -1.66
PRKNO60260 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.67□□□□□ -1.66
PRKNO60260 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.67□□□□□ -1.66
PRKNO60260 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.67□□□□□ -1.66
PRKNO60260 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.67□□□□□ -1.66
PRKNO60260 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.67□□□□□ -1.66
PRKNO60260 AC073137.1-201ENST00000605636 634 ntBASIC4.67□□□□□ -1.66
PRKNO60260 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.67□□□□□ -1.66
PRKNO60260 AL451049.1-201ENST00000608672 497 ntBASIC4.67□□□□□ -1.66
PRKNO60260 AC004948.1-201ENST00000609858 672 ntBASIC4.67□□□□□ -1.66
PRKNO60260 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.67□□□□□ -1.66
PRKNO60260 AC007275.1-201ENST00000621243 671 ntBASIC4.67□□□□□ -1.66
PRKNO60260 AC091905.4-201ENST00000623432 202 ntBASIC4.67□□□□□ -1.66
PRKNO60260 AC097520.1-201ENST00000624435 385 ntBASIC4.67□□□□□ -1.66
PRKNO60260 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.67□□□□□ -1.66
PRKNO60260 AC013437.2-201ENST00000639587 677 ntBASIC4.67□□□□□ -1.66
PRKNO60260 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.67□□□□□ -1.66
PRKNO60260 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PRKNO60260 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PRKNO60260 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PRKNO60260 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PRKNO60260 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRKNO60260 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.66□□□□□ -1.66
PRKNO60260 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.66□□□□□ -1.66
PRKNO60260 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.66□□□□□ -1.66
PRKNO60260 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.66□□□□□ -1.66
PRKNO60260 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRKNO60260 SNORA5.1-201ENST00000384275 131 ntBASIC4.66□□□□□ -1.66
PRKNO60260 MIR550A3-201ENST00000390735 95 ntBASIC4.66□□□□□ -1.66
PRKNO60260 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.66□□□□□ -1.66
PRKNO60260 CHEK2P3-201ENST00000416118 248 ntBASIC4.66□□□□□ -1.66
PRKNO60260 AF186996.5-201ENST00000418098 904 ntBASIC4.66□□□□□ -1.66
PRKNO60260 MTCYBP7-201ENST00000419540 1134 ntBASIC4.66□□□□□ -1.66
PRKNO60260 AC009506.2-201ENST00000420635 840 ntBASIC4.66□□□□□ -1.66
PRKNO60260 OR2AM1P-201ENST00000422137 422 ntBASIC4.66□□□□□ -1.66
PRKNO60260 BX119904.1-201ENST00000432026 348 ntBASIC4.66□□□□□ -1.66
PRKNO60260 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.66□□□□□ -1.66
PRKNO60260 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.66□□□□□ -1.66
PRKNO60260 VN1R54P-201ENST00000435210 1049 ntBASIC4.66□□□□□ -1.66
PRKNO60260 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.66□□□□□ -1.66
PRKNO60260 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.66□□□□□ -1.66
PRKNO60260 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.66□□□□□ -1.66
PRKNO60260 AC004854.1-201ENST00000440356 349 ntBASIC4.66□□□□□ -1.66
PRKNO60260 TXNP5-201ENST00000441043 315 ntBASIC4.66□□□□□ -1.66
PRKNO60260 AL353898.1-201ENST00000444055 238 ntBASIC4.66□□□□□ -1.66
PRKNO60260 AL354714.3-201ENST00000447284 493 ntBASIC4.66□□□□□ -1.66
PRKNO60260 SBDSP1-204ENST00000453858 737 ntBASIC4.66□□□□□ -1.66
PRKNO60260 AC104982.1-201ENST00000478775 574 ntBASIC4.66□□□□□ -1.66
PRKNO60260 SETP6-201ENST00000479329 568 ntBASIC4.66□□□□□ -1.66
PRKNO60260 OR5H3P-201ENST00000502817 919 ntBASIC4.66□□□□□ -1.66
PRKNO60260 AC098976.1-201ENST00000513014 541 ntBASIC4.66□□□□□ -1.66
PRKNO60260 BTF3P13-201ENST00000513224 490 ntBASIC4.66□□□□□ -1.66
PRKNO60260 HAUS1P3-201ENST00000523909 662 ntBASIC4.66□□□□□ -1.66
PRKNO60260 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.66□□□□□ -1.66
PRKNO60260 AP003066.2-201ENST00000529375 555 ntBASIC4.66□□□□□ -1.66
PRKNO60260 AP000676.2-201ENST00000529711 301 ntBASIC4.66□□□□□ -1.66
PRKNO60260 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.66□□□□□ -1.66
PRKNO60260 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.66□□□□□ -1.66
PRKNO60260 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.66□□□□□ -1.66
PRKNO60260 NMNAT1P1-201ENST00000554095 876 ntBASIC4.66□□□□□ -1.66
PRKNO60260 AL049838.1-201ENST00000563647 981 ntBASIC4.66□□□□□ -1.66
PRKNO60260 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.66□□□□□ -1.66
PRKNO60260 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.66□□□□□ -1.66
PRKNO60260 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.66□□□□□ -1.66
PRKNO60260 EIF1P5-201ENST00000585002 234 ntBASIC4.66□□□□□ -1.66
PRKNO60260 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.66□□□□□ -1.66
PRKNO60260 AP001033.2-201ENST00000609701 1003 ntBASIC4.66□□□□□ -1.66
PRKNO60260 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.66□□□□□ -1.66
PRKNO60260 AC087385.3-201ENST00000620477 187 ntBASIC4.66□□□□□ -1.66
PRKNO60260 AP000770.2-201ENST00000623694 100 ntBASIC4.66□□□□□ -1.66
PRKNO60260 AL353662.3-201ENST00000625131 237 ntBASIC4.66□□□□□ -1.66
PRKNO60260 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.66□□□□□ -1.66
PRKNO60260 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.66□□□□□ -1.66
PRKNO60260 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.66□□□□□ -1.66
PRKNO60260 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PRKNO60260 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.66□□□□□ -1.66
PRKNO60260 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRKNO60260 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRKNO60260 AL627171.1-201ENST00000618845 1308 ntBASIC4.66□□□□□ -1.66
PRKNO60260 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRKNO60260 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRKNO60260 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRKNO60260 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.65□□□□□ -1.66
PRKNO60260 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PRKNO60260 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
PRKNO60260 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms