Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SMAD6O43541 AC105254.2-201ENST00000603636 436 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 KATNBL1P5-201ENST00000605015 517 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 AC024940.4-201ENST00000605507 246 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 AL135786.2-201ENST00000608422 615 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 AC074276.2-201ENST00000619891 348 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 AC007275.1-201ENST00000621243 671 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 AC095038.2-201ENST00000621464 1070 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 AP002967.1-201ENST00000624203 539 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.2□□□□□ -1.58
SMAD6O43541 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SMAD6O43541 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SMAD6O43541 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SMAD6O43541 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SMAD6O43541 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SMAD6O43541 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.2□□□□□ -1.58
SMAD6O43541 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.2□□□□□ -1.58
SMAD6O43541 AL355578.1-201ENST00000607405 1328 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SMAD6O43541 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SMAD6O43541 NXF4-202ENST00000416098 1465 ntBASIC5.2□□□□□ -1.58
SMAD6O43541 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.19□□□□□ -1.58
SMAD6O43541 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 AC110792.3-201ENST00000595906 1614 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.19□□□□□ -1.58
SMAD6O43541 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SMAD6O43541 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SMAD6O43541 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.19□□□□□ -1.58
SMAD6O43541 RN7SKP104-201ENST00000362605 328 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 RNA5SP123-201ENST00000363244 119 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 RNA5SP223-201ENST00000365174 120 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SMAD6O43541 VN1R51P-201ENST00000411675 945 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.19□□□□□ -1.58
SMAD6O43541 MTCO2P21-201ENST00000419780 677 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 AC092570.3-201ENST00000420113 693 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 DDX39BP1-205ENST00000422507 192 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.19□□□□□ -1.58
SMAD6O43541 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.19□□□□□ -1.58
SMAD6O43541 ELOCP3-201ENST00000439303 348 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.19□□□□□ -1.58
SMAD6O43541 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.19□□□□□ -1.58
SMAD6O43541 snoU13.20-201ENST00000459180 104 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 AC020898.1-201ENST00000474167 787 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 AC104982.1-201ENST00000478775 574 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.19□□□□□ -1.58
SMAD6O43541 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.19□□□□□ -1.58
SMAD6O43541 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.19□□□□□ -1.58
SMAD6O43541 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 UBTFL10-201ENST00000528532 562 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.19□□□□□ -1.58
SMAD6O43541 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SMAD6O43541 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.19□□□□□ -1.58
SMAD6O43541 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.19□□□□□ -1.58
SMAD6O43541 MIR4646-201ENST00000580775 63 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.19□□□□□ -1.58
SMAD6O43541 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.19□□□□□ -1.58
SMAD6O43541 AC068880.4-201ENST00000623082 495 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.19□□□□□ -1.58
SMAD6O43541 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.19□□□□□ -1.58
SMAD6O43541 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SMAD6O43541 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.19□□□□□ -1.58
SMAD6O43541 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMAD6O43541 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SMAD6O43541 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMAD6O43541 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMAD6O43541 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.18□□□□□ -1.58
SMAD6O43541 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMAD6O43541 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMAD6O43541 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.18□□□□□ -1.58
SMAD6O43541 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMAD6O43541 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMAD6O43541 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMAD6O43541 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMAD6O43541 BMS1P3-201ENST00000372011 932 ntBASIC5.18□□□□□ -1.58
SMAD6O43541 OR13C3-201ENST00000374781 1108 ntBASIC5.18□□□□□ -1.58
SMAD6O43541 AC104297.1-201ENST00000393779 870 ntBASIC5.18□□□□□ -1.58
SMAD6O43541 AL024507.1-201ENST00000412741 274 ntBASIC5.18□□□□□ -1.58
SMAD6O43541 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.18□□□□□ -1.58
SMAD6O43541 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.18□□□□□ -1.58
SMAD6O43541 PA2G4P6-201ENST00000438325 1197 ntBASIC5.18□□□□□ -1.58
SMAD6O43541 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.18□□□□□ -1.58
SMAD6O43541 SUMO2P1-206ENST00000445436 284 ntBASIC5.18□□□□□ -1.58
SMAD6O43541 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms